RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SLC17A4Q9Y2C5 497 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 EXOSC1Q9Y3B2 195 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 TMED7Q9Y3B3 224 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 RHBDD3Q9Y3P4 386 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 OR1A2Q9Y585 309 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 PCDHGA1Q9Y5H4 931 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KLK4Q9Y5K2 254 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KCNE2Q9Y6J6 123 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ICOSQ9Y6W8 199 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 DISP1Q96F81 1524 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ITPR1Q14643 2758 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 KDM6BO15054 1643 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 ITPR2Q14571 2701 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 SYNJ2O15056 1496 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 BAZ1BQ9UIG0 1483 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 DOCK8Q8NF50 2099 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
TRAJ28-201ENST00000390509 GLI3P10071 1580 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 UBE4BO95155 1302 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MROH5Q6ZUA9 1318 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ABCA1O95477 2261 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ADAMTS7Q9UKP4 1686 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PLCH2O75038 1416 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TET1Q8NFU7 2136 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 LAMC1P11047 1609 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A075B6Q4 140 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A087WSZ3 146 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A087WV62 115 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAV19A0A0A6YYK7 116 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TRGV5A0A0B4J1U4 118 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 IGHV3-15A0A0B4J1V0 119 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A0B4J2C4 111 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A1B0GWJ7 208 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A0A1W2PPW3 197 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CLRN2A0PK11 232 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ANKRD62A6NC57 917 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 FAM47DPA6NHR8 397 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ARHGAP42A6NI28 874 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR52A4PA6NMU1 304 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 A8MWL6 223 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 VSTM5A8MXK1 200 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ZNF99A8MXY4 864 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 C12orf77C9JDV5 145 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 C5orf67F2Z3F1 127 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TRAPPC2LH3BP13 241 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TRIM77I1YAP6 450 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 M0R296 226 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 DDX39AO00148 427 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SH2D1BO14796 132 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CHUKO15111 745 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PPIHO43447 177 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SYT7O43581 403 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PLIN1O60240 522 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CDC40O60508 579 aaKnown RBP eCLIP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SURF6O75683 361 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GATBO75879 557 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 REC8O95072 547 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 FARS2O95363 451 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MOCS2O96007 188 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CSTBP04080 98 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 IGF1P05019 195 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 EIF2S1P05198 315 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ABCB1P08183 1280 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GSTA1P08263 222 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TPBGLP0DKB5 382 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CT45A8P0DMV1 189 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CT45A9P0DMV2 189 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CCDC130P13994 396 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CPMP14384 443 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 PFKFB1P16118 471 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GABRB1P18505 474 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NELFEP18615 380 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CAPN3P20807 821 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 USF1P22415 310 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ATP5A1P25705 553 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GJB2P29033 226 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 OR1D2P34982 312 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CTNNA1P35221 906 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 COILP38432 576 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CDKN2BP42772 138 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NSG1P42857 185 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MAGEA1P43355 309 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ETV1P50549 477 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 MFAP3P55082 362 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 CDH8P55286 799 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 BIDP55957 195 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TAS2R43P59537 309 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 RPS15AP62244 130 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 RPS4XP62701 263 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 POLR2LP62875 67 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ELF3P78545 371 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ERHP84090 104 aaKnown RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 ICA1Q05084 483 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 UBE3AQ05086 875 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 GABPAQ06546 454 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SLC3A1Q07837 685 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 SPAG11BQ08648 103 aa-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 TMEM267Q0VDI3 215 aaPredicted RBP-0.62□□□□□ -2.51
TRAJ28-201ENST00000390509 NPRL3Q12980 569 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms