RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 RPF2Q9H7B2 306 aaKnown RBP0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 FN3KRPQ9HA64 309 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 C8orf17Q9NRJ1 99 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 ASF1BQ9NVP2 202 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 TERF2IPQ9NYB0 399 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 SPASTQ9UBP0 616 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 LAMP5Q9UJQ1 280 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 ATP6V0A2Q9Y487 856 aa0.24□□□□□ -2.37
TRAJ48-201ENST00000390489 MYO9BQ13459 2157 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 IGKV1D-43A0A0B4J1Z2 117 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CEACAM18A8MTB9 384 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CCDC22O60826 627 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 REM1O75628 298 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CNMDO75829 334 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 ATP5LO75964 103 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 MBD3O95983 291 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 IGLV3-25P01717 112 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 ANGP03950 147 aaKnown RBP0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 FUT1P19526 365 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 DNAJB1P25685 340 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 FDFT1P37268 417 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 QARSP47897 775 aaKnown RBP0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 RFX3P48380 749 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CCNA1P78396 465 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 ZNF92Q03936 586 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 TPBGQ13641 420 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 SP6Q3SY56 376 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 ANKRD22Q5VYY1 191 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 METTL21CQ5VZV1 264 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 AMMECR1LQ6DCA0 310 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 H3F3CQ6NXT2 135 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 PRSS54Q6PEW0 395 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 WDR59Q6PJI9 974 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 FBXW12Q6X9E4 464 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 RBM43Q6ZSC3 357 aaKnown RBP0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 NAA40Q86UY6 237 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 NUDCD3Q8IVD9 361 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 EMG1Q92979 244 aaKnown RBP0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 TMEM54Q969K7 222 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 MRGPRFQ96AM1 343 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CXorf40BQ96DE9 158 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 SORT1Q99523 831 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 CHCHD7Q9BUK0 85 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 UFSP2Q9NUQ7 469 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 IL37Q9NZH6 218 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 EPS15L1Q9UBC2 864 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 FETUBQ9UGM5 382 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 PCSK1NQ9UHG2 260 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 RPH3ALQ9UNE2 315 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 TMED5Q9Y3A6 229 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 OR10H1Q9Y4A9 318 aa0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 TSSC4Q9Y5U2 329 aaPredicted RBP0.23□□□□□ -2.37
TRAJ48-201ENST00000390489 DNALI1O14645 258 aaPredicted RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 POLR2DO15514 142 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 MED7O43513 233 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 TGFAP01135 160 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 IGHV2-5P01817 119 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 CSRP1P21291 193 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 GNA11P29992 359 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 HSD17B2P37059 387 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 RPL13AP40429 203 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 YAP1P46937 504 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 UBE2NP61088 152 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 NUCB2P80303 420 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 CDK16Q00536 496 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 PJVKQ0ZLH3 352 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 C1orf61Q13536 156 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 DGUOKQ16854 277 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 ZNF181Q2M3W8 571 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 YIF1BQ5BJH7 314 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 C10orf120Q5SQS8 335 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 TMEM69Q5SWH9 247 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 MED27Q6P2C8 311 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 KCNIP4Q6PIL6 250 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 PLET1Q6UQ28 207 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 DEFB119Q8N690 84 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 HSD17B11Q8NBQ5 300 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 ZNF502Q8TBZ5 544 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 NPY6RQ99463 290 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 HSD17B10Q99714 261 aaKnown RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 GPA33Q99795 319 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 FGF23Q9GZV9 251 aaPredicted RBP0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 SLC38A10Q9HBR0 1119 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 SLC2A8Q9NY64 477 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 BFARQ9NZS9 450 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 ZNF492Q9P255 531 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 KCNIP3Q9Y2W7 256 aa0.22□□□□□ -2.37
TRAJ48-201ENST00000390489 IGHV3-49A0A0A0MS15 119 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 FAM170AA1A519 330 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 OR6C74A6NCV1 312 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 CHADO15335 359 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 AQP9O43315 295 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 EIF1BO60739 113 aaKnown RBP0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 TOM1O60784 492 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 EIF3GO75821 320 aaKnown RBP eCLIP0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 NEBLO76041 1014 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 SLC22A5O76082 557 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 SCELO95171 688 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 IGHV3-11P01762 117 aa0.21□□□□□ -2.38
TRAJ48-201ENST00000390489 HSMCR30P0CW71 290 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms