RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 AGAP14A8MT82 685 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 M0R135 149 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 HRO43593 1189 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 NARSO43776 548 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 HPP00738 406 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 NRASP01111 189 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 ALPLP05186 524 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 DTYMKP23919 212 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 TAGLN2P37802 199 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PPP2CBP62714 309 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PPP2CAP67775 309 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 OR1C1Q15619 314 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 DUSP5Q16690 384 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 ATPAF1Q5TC12 328 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 DCXRQ7Z4W1 244 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 KDM8Q8N371 416 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 C15orf54Q8N8G6 183 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 WFDC5Q8TCV5 224 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF799Q96GE5 643 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 CMTM3Q96MX0 182 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 CMC2Q9NRP2 79 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 LIN7CQ9NUP9 197 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PSORS1C1Q9UIG5 152 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 ANKRD36CQ5JPF3 1778 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 TRBV4-1A0A0J9YWV2 114 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 BET1O15155 118 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PMS2P2O95744 297 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 SOD1P00441 154 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 HLA-AP01891 365 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PSMB1P20618 241 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 HOXC8P31273 242 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 GALNSP34059 522 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 DIO1P49895 249 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 UBE2G2P60604 165 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 CCL7P80098 99 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 HOXC5Q00444 222 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 DHODHQ02127 395 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 Q6ZRG5 221 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 YRDCQ86U90 279 aaKnown RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 GABRG1Q8N1C3 465 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 PP6455Q8WZ26 134 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 WBP2Q969T9 261 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 C12orf49Q9H741 205 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 CRLF2Q9HC73 371 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 AMMECR1Q9Y4X0 333 aaPredicted RBP6.55□□□□□ -1.36
CCDC171-201ENST00000380701 NUP98P52948 1817 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 GLI3P10071 1580 aa6.55□□□□□ -1.36
CCDC171-201ENST00000380701 BAZ2AQ9UIF9 1905 aaKnown RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SMAD9O15198 467 aaKnown RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 TAPBPO15533 448 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 TFPTP0C1Z6 253 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 OR8U8P0C7N1 319 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 CD1EP15812 388 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 HNF1AP20823 631 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 TMEM108Q6UXF1 575 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 MDGA2Q7Z553 956 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SYT9Q86SS6 491 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 OR11G2Q8NGC1 345 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 LINC01599Q8WXQ3 324 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ZCCHC4Q9H5U6 513 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SLC25A19Q9HC21 320 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 LANCL2Q9NS86 450 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ACOD1A6NK06 481 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 NDUFB3O43676 98 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 CXCL13O43927 109 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 QDPRP09417 244 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ALDOCP09972 364 aaKnown RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ELK1P19419 428 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 CEACAM3P40198 252 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 BPIFB3P59826 476 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ERHP84090 104 aaKnown RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 MS4A2Q01362 244 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 FAPQ12884 760 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 FAM162BQ5T6X4 162 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 H2BFWTQ7Z2G1 175 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 TSEN54Q7Z6J9 526 aaKnown RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ZDHHC23Q8IYP9 409 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SUMF2Q8NBJ7 301 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 GHSRQ92847 366 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 FGF14Q92915 247 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 FAM3DQ96BQ1 224 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 TAAR6Q96RI8 345 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 WWTR1Q9GZV5 400 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 RAB1BQ9H0U4 201 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 OCIAD1Q9NX40 245 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 P4HTMQ9NXG6 502 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 A0A1W2PR48 441 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 XKRY2A2RUG3 117 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF705EA8MWA4 302 aaPredicted RBP6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SSX4O60224 188 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 SSX5O60225 188 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 FGF17O60258 216 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 AKR7A3O95154 331 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 ADRA2CP18825 462 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 AADACP22760 399 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 GABRB3P28472 473 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 PLA2G7Q13093 441 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 MPPED2Q15777 294 aa6.54□□□□□ -1.36
CCDC171-201ENST00000380701 LYPD8Q6UX82 237 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms