RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SIGLEC12Q96PQ1 595 aa17.68■□□□□ 0.42
PDLIM5-205ENST00000380180 AK6Q9Y3D8 172 aaKnown RBP17.68■□□□□ 0.42
PDLIM5-205ENST00000380180 NCOA6Q14686 2063 aaPredicted RBP17.68■□□□□ 0.42
PDLIM5-205ENST00000380180 TMEM212A6NML5 194 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 GJE1A6NN92 205 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ZNF726A6NNF4 738 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 TRAPPC6AO75865 159 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 AQP8O94778 261 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 PNPP00491 289 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 KIR3DL2P43630 455 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 RASGEF1BQ0VAM2 473 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ODF4Q2M2E3 257 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 Q499Y3 187 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 WDR38Q5JTN6 314 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 DTX1Q86Y01 620 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ZNF676Q8N7Q3 588 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ST7LQ8TDW4 575 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ADAMTS14Q8WXS8 1223 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 C11orf40Q8WZ69 217 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 C4orf45Q96LM5 186 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 UCN2Q96RP3 112 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 SOSTQ9BQB4 213 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 UTP23Q9BRU9 249 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 MFRPQ9BY79 579 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 COMMD4Q9H0A8 199 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ZCCHC4Q9H5U6 513 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 LRP12Q9Y561 859 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 NOTOA8MTQ0 251 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ELK1P19419 428 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 LAP3P28838 519 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 CASRP41180 1078 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 RIDAP52758 137 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 CLDN17P56750 224 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 FOXO1Q12778 655 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 MFAP5Q13361 173 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 CORO6Q6QEF8 472 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 TMPRSS12Q86WS5 348 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 NAA11Q9BSU3 229 aaPredicted RBP17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 ZFP64Q9NPA5 681 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 TBCCD1Q9NVR7 557 aa17.67■□□□□ 0.42
PDLIM5-205ENST00000380180 TRBV5-5A0A0J9YX44 114 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 CDRT15L2A8MXV6 281 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 SLC19A2O60779 497 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 EPXP11678 715 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 RBMS1P29558 406 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 CLDN20P56880 219 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 HIST3H3Q16695 136 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 WIPI1Q5MNZ9 446 aaPredicted RBP17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 SLC25A47Q6Q0C1 308 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 LINC00696Q6ZRV3 163 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 CLEC1AQ8NC01 280 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 OR10AC1Q8NH08 325 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 KCNE4Q8WWG9 221 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 MCHR2Q969V1 340 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 FER1L6-AS2Q96M78 137 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 ABI3Q9P2A4 366 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 MALT1Q9UDY8 824 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 ADAM30Q9UKF2 790 aa17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 MRPS18CQ9Y3D5 142 aaKnown RBP17.66■□□□□ 0.42
PDLIM5-205ENST00000380180 A0A1W2PPL8 197 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 FAM25AB3EWG3 89 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 FAM25CB3EWG5 89 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 FAM25GB3EWG6 89 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 VAMP5O95183 116 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 PAHP00439 452 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 ENPP1P22413 925 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 GDF1P27539 372 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 APEX1P27695 318 aaKnown RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SOX2P48431 317 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 CCR9P51686 369 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 PYDC2Q56P42 97 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 METAP1DQ6UB28 335 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 CREB3L2Q70SY1 520 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 GDPD1Q8N9F7 314 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 OR10H5Q8NGA6 315 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 OR51A4Q8NGJ6 313 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 PPP1R14AQ96A00 147 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 KIAA1143Q96AT1 154 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SRXN1Q9BYN0 137 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SLC25A18Q9H1K4 315 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 PPP1R3EQ9H7J1 279 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SP140LQ9H930 580 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 PLA2G3Q9NZ20 509 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SLC22A13Q9Y226 551 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 H3BSH0 61 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 ZNF432O94892 652 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 WDPCPO95876 746 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 IL7P13232 177 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 ATF1P18846 271 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 MAPK3P27361 379 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 CD82P27701 267 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 DEFA1P59665 94 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 DEFA3P59666 94 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 MFGE8Q08431 387 aaPredicted RBP17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 P2RY14Q15391 338 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 ATP1A1-AS1Q5TC04 95 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 LRFN4Q6PJG9 635 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SAMD12Q8N8I0 201 aa17.65■□□□□ 0.42
PDLIM5-205ENST00000380180 SFXN2Q96NB2 322 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms