RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ZNF44P15621 663 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SERPINA2P20848 420 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM200AQ86VY9 491 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 DNAAF1Q8NEP3 725 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SLCO5A1Q9H2Y9 848 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 RAB9BQ9NP90 201 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ADAM18Q9Y3Q7 739 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 LILRA5A6NI73 299 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 DSCR3O14972 297 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 APOBEC1P41238 236 aaKnown RBP13.73□□□□□ -0.21
NPHP4-201ENST00000378156 EMP3P54852 163 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 BAK1Q16611 211 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 C6orf15Q6UXA7 325 aaPredicted RBP13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ESPNLQ6ZVH7 1005 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SLAMF9Q96A28 289 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ZNF845Q96IR2 970 aaPredicted RBP13.73□□□□□ -0.21
NPHP4-201ENST00000378156 HINT2Q9BX68 163 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SMIM3Q9BZL3 60 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 CHRNA9Q9UGM1 479 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ADAM23O75077 832 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 PCMT1P22061 227 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
NPHP4-201ENST00000378156 AMER3Q8N944 861 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 A4GNTQ9UNA3 340 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 EMC9Q9Y3B6 208 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 FBXO24O75426 580 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ERVK-16P61578 105 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MPEG1Q2M385 716 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MEX3BQ6ZN04 569 aaKnown RBP13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SYT9Q86SS6 491 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 PRR18Q8N4B5 295 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 C22orf15Q8WYQ4 148 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 CMC2Q9NRP2 79 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MUTYHQ9UIF7 546 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ATAD5Q96QE3 1844 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 TRABD2BA6NFA1 517 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 B4DXG7 233 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SPNP16150 400 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 EFNA3P52797 238 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 CDC20Q12834 499 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ETFBKMTQ8IXQ9 262 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ZFP82Q8N141 532 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 PAPOLGQ9BWT3 736 aaKnown RBP13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ATP6V1G2-DDX39BF2Z307 99 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SURF4O15260 269 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 FKBP2P26885 142 aaKnown RBP13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ALKBH1Q13686 389 aaKnown RBP13.72□□□□□ -0.21
NPHP4-201ENST00000378156 GPR176Q14439 515 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 BEX5Q5H9J7 111 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SSX9Q7RTT3 188 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MORN4Q8NDC4 146 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 GPR32P1Q8NGA4 272 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MARC2Q969Z3 335 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 C8orf44Q96CB5 159 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 MUCL1Q96DR8 90 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SEMA4CQ9C0C4 833 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 PCED1AQ9H1Q7 454 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 CALHM2Q9HA72 323 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 LIN7BQ9HAP6 207 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SLC25A19Q9HC21 320 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 HOXB5P09067 269 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 CNR1P21554 472 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SERPINF1P36955 418 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 GABREP78334 506 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 SLC30A7Q8NEW0 376 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 ACOXLQ9NUZ1 547 aa13.72□□□□□ -0.21
NPHP4-201ENST00000378156 A0A0A6YYD5 115 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 AKR7A3O95154 331 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 CSF3P09919 207 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 EPHA1P21709 976 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 MTCP1P56278 107 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 RPL27P61353 136 aaKnown RBP13.71□□□□□ -0.21
NPHP4-201ENST00000378156 SOHLH1Q5JUK2 328 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 SIRT6Q8N6T7 355 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 PIGMQ9H3S5 423 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 ETV7Q9Y603 341 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 TRBV5-3A0A0A0MS03 114 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 AGAP14A8MT82 685 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 TRAPPC2LH3BP13 241 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 TPBGQ13641 420 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM71Q6P5X7 295 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-201ENST00000378156 A0A1W2PPV4 95 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 PRKNO60260 465 aaPredicted RBP13.71□□□□□ -0.21
NPHP4-201ENST00000378156 HIST1H1CP16403 213 aaKnown RBP13.71□□□□□ -0.21
NPHP4-201ENST00000378156 SRMP19623 302 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 HTR2CP28335 458 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 RBPJQ06330 500 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 AGERQ15109 404 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 SLC36A2Q495M3 483 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 NT5CQ8TCD5 201 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 THOC3Q96J01 351 aaKnown RBP13.71□□□□□ -0.21
NPHP4-201ENST00000378156 OBP2BQ9NPH6 170 aa13.71□□□□□ -0.21
NPHP4-201ENST00000378156 DRD3P35462 400 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 CCR9P51686 369 aa13.71□□□□□ -0.22
NPHP4-201ENST00000378156 MZT1Q08AG7 82 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms