RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MR1Q95460 341 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 MCHR2Q969V1 340 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 MIB2Q96AX9 1013 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 KCNK17Q96T54 332 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 CMKLR1Q99788 373 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 C7orf50Q9BRJ6 194 aaKnown RBP18.12■□□□□ 0.49
VSX1-202ENST00000376709 CACNG6Q9BXT2 260 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 TMEM185BQ9H7F4 350 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 COPZ2Q9P299 210 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 NUBP2Q9Y5Y2 271 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 KIF26BQ2KJY2 2108 aa18.12■□□□□ 0.49
VSX1-202ENST00000376709 IGLV3-32A0A0A0MS00 114 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 NPIPB13A6NJU9 1138 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 NPIPB4C9JG80 1138 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 EFNA2O43921 213 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 WNT11O96014 354 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 MT-ND4P03905 459 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 TCRBP04435 133 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 YES1P07947 543 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 MFGE8Q08431 387 aaPredicted RBP18.11■□□□□ 0.49
VSX1-202ENST00000376709 SLC22A10Q63ZE4 541 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 TCEAL6Q6IPX3 200 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 ELP5Q8TE02 316 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 TCEAL3Q969E4 200 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 FBXO4Q9UKT5 387 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 FAM47E-STBD1D6RA91 191 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 M0R296 226 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 SYPP08247 313 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 KLF9Q13886 244 aaPredicted RBP18.11■□□□□ 0.49
VSX1-202ENST00000376709 PCOLCEQ15113 449 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 SLC25A53Q5H9E4 307 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 TIGD3Q6B0B8 471 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 C3orf33Q6P1S2 294 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 NDUFAF7Q7L592 441 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 WDFY1Q8IWB7 410 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 BMPERQ8N8U9 685 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 HAVCR1Q96D42 359 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 FBXL2Q9UKC9 423 aa18.11■□□□□ 0.49
VSX1-202ENST00000376709 A0A0A6YYJ9 748 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 A6NL46 340 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 H0YC42 278 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 GABARAPH6UMI1 98 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 OPN1LWP04000 364 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 CCL4P13236 92 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 CCR6P51684 374 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 BIDP55957 195 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 TRA2AQ13595 282 aaKnown RBP eCLIP18.1■□□□□ 0.49
VSX1-202ENST00000376709 DYRK1AQ13627 763 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 DCXRQ7Z4W1 244 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 OR5M1Q8NGP8 315 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 POC1BQ8TC44 478 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 FCAMRQ8WWV6 532 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 PPP1R14AQ96A00 147 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 EMC6Q9BV81 110 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 KLHL9Q9P2J3 617 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 STEAP1Q9UHE8 339 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 FOXJ3Q9UPW0 622 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 DHDHQ9UQ10 334 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 PTRH2Q9Y3E5 179 aaKnown RBP18.1■□□□□ 0.49
VSX1-202ENST00000376709 CDK2P24941 298 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 C19orf57Q0VDD7 668 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 LINC00346Q8IVM7 164 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 OR2M3Q8NG83 312 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 OR4K17Q8NGC6 315 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 OR52I2Q8NH67 350 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 TMEM246Q9BRR3 403 aa18.1■□□□□ 0.49
VSX1-202ENST00000376709 MRPL15Q9P015 296 aaKnown RBP18.1■□□□□ 0.49
VSX1-202ENST00000376709 RPH3AQ9Y2J0 694 aaPredicted RBP18.1■□□□□ 0.49
VSX1-202ENST00000376709 C9J4A7 227 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 TP53I11O14683 189 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 SULT1B1O43704 296 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 KHDRBS3O75525 346 aaKnown RBP18.09■□□□□ 0.49
VSX1-202ENST00000376709 SDHBP21912 280 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 PTGS2P35354 604 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 PRAMEF20Q5VT98 475 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 CATSPERDQ86XM0 798 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 ASCC1Q8N9N2 400 aaKnown RBP18.09■□□□□ 0.49
VSX1-202ENST00000376709 PTGES2Q9H7Z7 377 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 RCE1Q9Y256 329 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 EMC9Q9Y3B6 208 aa18.09■□□□□ 0.49
VSX1-202ENST00000376709 LOC102723996A0A087X1L8 192 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 IGKV1D-43A0A0B4J1Z2 117 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 A0A1W2PNV4 684 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 KRT33AO76009 404 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 CELA2AP08217 269 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 PTH2RP49190 550 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 RPS15P62841 145 aaKnown RBP18.08■□□□□ 0.49
VSX1-202ENST00000376709 ZFP36L1Q07352 338 aaKnown RBP18.08■□□□□ 0.49
VSX1-202ENST00000376709 FBXL3Q9UKT7 428 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 B3GALT1Q9Y5Z6 326 aa18.08■□□□□ 0.49
VSX1-202ENST00000376709 IGHV1-45A0A0A0MS14 117 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 TEX51A0A1B0GUA7 166 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 ECDO95905 644 aaPredicted RBP18.08■□□□□ 0.48
VSX1-202ENST00000376709 CD2P06729 351 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 UMODP07911 640 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 AP3S2P59780 193 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 Q5BKY6 102 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 FAM198BQ6UWH4 519 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 GLB1L2Q8IW92 636 aa18.08■□□□□ 0.48
VSX1-202ENST00000376709 OR5B2Q96R09 309 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms