RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FAHD2AQ96GK7 314 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 PRRC1Q96M27 445 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 RBM4Q9BWF3 364 aaKnown RBP12.59□□□□□ -0.39
HDAC6-204ENST00000376643 LPAR2Q9HBW0 351 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 NDRG4Q9ULP0 352 aaKnown RBP12.59□□□□□ -0.39
HDAC6-204ENST00000376643 HIF3AQ9Y2N7 669 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 TIMM10BQ9Y5J6 103 aa12.59□□□□□ -0.39
HDAC6-204ENST00000376643 C5orf49A4QMS7 147 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 FAM220BPB1ANY3 271 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 CDC14BO60729 498 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 MPZL1O95297 269 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 IGHMP01871 453 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 CST2P09228 141 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 TSPAN19P0C672 248 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 ZNF32P17041 273 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
HDAC6-204ENST00000376643 ACTG1P63261 375 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 RUNX1T1Q06455 604 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 PIN1Q13526 163 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-204ENST00000376643 SGCAQ16586 387 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 MBNL2Q5VZF2 373 aaKnown RBP12.58□□□□□ -0.4
HDAC6-204ENST00000376643 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 PAQR4Q8N4S7 273 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-204ENST00000376643 BPIFA2Q96DR5 249 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 COG8Q96MW5 612 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 TMEM120AQ9BXJ8 343 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 PCDHB10Q9UN67 800 aa12.58□□□□□ -0.4
HDAC6-204ENST00000376643 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 FBP2O00757 339 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 ICMTO60725 284 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 SLC2A10O95528 541 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 ADH4P08319 380 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 GSTM3P21266 225 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 EPHA1P21709 976 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 TNFSF4P23510 183 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 KDELR2P33947 212 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 SLC9A3P48764 834 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 CRYBA2P53672 197 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 SRSF2Q01130 221 aaKnown RBP12.57□□□□□ -0.4
HDAC6-204ENST00000376643 MVKQ03426 396 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 LRRC23Q53EV4 343 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-204ENST00000376643 CYBRD1Q53TN4 286 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 RABL3Q5HYI8 236 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 TSPYL5Q86VY4 417 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-204ENST00000376643 NPEPL1Q8NDH3 523 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 OR2T12Q8NG77 320 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 NANPQ8TBE9 248 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 NSMAFQ92636 917 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 POM121L2Q96KW2 1035 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 GAL3ST1Q99999 423 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 WIPI2Q9Y4P8 454 aa12.57□□□□□ -0.4
HDAC6-204ENST00000376643 NDUFAB1O14561 156 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 SLC22A2O15244 555 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 AHCYL1O43865 530 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 IFNW1P05000 195 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 COX5BP10606 129 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 IFI30P13284 250 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 MSR1P21757 451 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 ARFIP2P53365 341 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 HILS1P60008 231 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 ERVS71-1P61550 626 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 SELENOWP63302 87 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 SCRN3Q0VDG4 424 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 TSTQ16762 297 aaKnown RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 DCAF12L2Q5VW00 463 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 C1QL2Q7Z5L3 287 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 RNF113BQ8IZP6 322 aaKnown RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 SEMA6DQ8NFY4 1073 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 ABHD4Q8TB40 342 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 KLF14Q8TD94 323 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 FAM216AQ8WUB2 273 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 C10orf82Q8WW14 230 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 NABP1Q96AH0 204 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 NMD3Q96D46 503 aaKnown RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
HDAC6-204ENST00000376643 TPD52L3Q96J77 140 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 FNDC11Q9BVV2 318 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 G6PC2Q9NQR9 355 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 UGT2A1Q9Y4X1 527 aa12.56□□□□□ -0.4
HDAC6-204ENST00000376643 SVEP1Q4LDE5 3571 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 ELOVL7A1L3X0 281 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 FXYD1O00168 92 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 XKRYO14609 159 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 SURF4O15260 269 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 SPRY3O43610 288 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 PLPP2O43688 288 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 FOXH1O75593 365 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 IGHV2-5P01817 119 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 CD55P08174 381 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 TNFRSF1AP19438 455 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 FPR2P25090 351 aa12.55□□□□□ -0.4
HDAC6-204ENST00000376643 CDAP32320 146 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms