RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 FAM166AQ6J272 317 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 C11orf88Q6PI97 169 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 ALKAL2Q6UX46 152 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 SPERTQ8NA61 448 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 GPX8Q8TED1 209 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 ASB5Q8WWX0 329 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 PTDSS2Q9BVG9 487 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 C1QTNF6Q9BXI9 259 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 REG4Q9BYZ8 158 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 APMAPQ9HDC9 416 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 SDHAF2Q9NX18 166 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 CKLFQ9UBR5 152 aa13.11□□□□□ -0.31
MSH5-201ENST00000375703 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 TMEM131Q92545 1883 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 LILRA5A6NI73 299 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 CD2P06729 351 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 RIDAP52758 137 aaKnown RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 ROM1Q03395 351 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 EIF2B1Q14232 305 aaKnown RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 RGS7BPQ6MZT1 257 aaPredicted RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 GKN2Q86XP6 184 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 ZNF519Q8TB69 540 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 C8orf44Q96CB5 159 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 WBP1Q96G27 269 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 UCK1Q9HA47 277 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 MED11Q9P086 117 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 TMED7-TICAM2A0A0A6YYA0 188 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 ARPC4-TTLL3A0A0A6YYG9 625 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 ALG1L2C9J202 215 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 TSPAN2O60636 221 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 PPP3CBP16298 524 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 CTLA4P16410 223 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 PRKACBP22694 351 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 MFGE8Q08431 387 aaPredicted RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 GLYATL3Q5SZD4 288 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 B3GNTL1Q67FW5 361 aaPredicted RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 Q6ZS52 159 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 ZNF627Q7L945 461 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 MDGA2Q7Z553 956 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 GABRG1Q8N1C3 465 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 DHCR7Q9UBM7 475 aaKnown RBP13.1□□□□□ -0.31
MSH5-201ENST00000375703 TMED7Q9Y3B3 224 aa13.1□□□□□ -0.31
MSH5-201ENST00000375703 IGKV3D-11A0A0A0MRZ8 115 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 IGLV1-36A0A0B4J1U3 117 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 TTLL8A6PVC2 850 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 GABRA1P14867 456 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 HTR2CP28335 458 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 ACTBP60709 375 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 ACTG1P63261 375 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 PLCXD2Q0VAA5 305 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 EBPQ15125 230 aaKnown RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 ELAVL1Q15717 326 aaKnown RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 SCARB1Q8WTV0 552 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 SEH1LQ96EE3 360 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 CXorf58Q96LI9 332 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 SPTBN5Q9NRC6 3674 aaKnown RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 A0A1W2PQD3 144 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 NMBP08949 121 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 POLR2HP52434 150 aaKnown RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 TAS2R19P59542 299 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 MPPED2Q15777 294 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 CATSPERDQ86XM0 798 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 ALX4Q9H161 411 aaPredicted RBP13.09□□□□□ -0.31
MSH5-201ENST00000375703 POFUT1Q9H488 388 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 TAS2R4Q9NYW5 299 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 UPB1Q9UBR1 384 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
MSH5-201ENST00000375703 POM121CA8CG34 1229 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 A8MVM7 634 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 SULT1C2O00338 296 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 RAB3DO95716 219 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 ITGB2P05107 769 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 TOMM20Q15388 145 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 NSDHLQ15738 373 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 PRAMEF17Q5VTA0 474 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 C1orf140Q5VVS0 124 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 GSG1LQ6UXU4 331 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 DUSP19Q8WTR2 217 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 ZDHHC12Q96GR4 267 aa13.08□□□□□ -0.32
MSH5-201ENST00000375703 SLC25A44Q96H78 314 aaPredicted RBP13.08□□□□□ -0.32
MSH5-201ENST00000375703 COA3Q9Y2R0 106 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms