RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ACKR3P25106 362 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 AKR1C3P42330 323 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 OR2B8PP59922 312 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 ZP2Q05996 745 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 HMGN3Q15651 99 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 DRAM2Q6UX65 266 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 DNM1P46Q6ZS02 220 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 OLIG3Q7RTU3 272 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 TMED6Q8WW62 240 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 MESP1Q9BRJ9 268 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 TGIF2Q9GZN2 237 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 SLITRK2Q9H156 845 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 RHBGQ9H310 441 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 FBRSQ9HAH7 460 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 GAR1Q9NY12 217 aaKnown RBP11.02□□□□□ -0.64
C9orf3-203ENST00000375315 NOP16Q9Y3C1 178 aaKnown RBP11.02□□□□□ -0.64
C9orf3-203ENST00000375315 KPTNQ9Y664 436 aa11.02□□□□□ -0.64
C9orf3-203ENST00000375315 TRBV2A0A0J9YWF9 115 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1W2PPV9 198 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ZNF860A6NHJ4 632 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 MFNGO00587 321 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 NDUFS4O43181 175 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 HOXB5P09067 269 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 BMP7P18075 431 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 HOXA5P20719 270 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ITPKBP27987 946 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 KCNAB1Q14722 419 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 TP53I3Q53FA7 332 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 PRAMEF17Q5VTA0 474 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 TMED4Q7Z7H5 227 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 KLHDC8AQ8IYD2 350 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 OR2A1Q8NGT9 310 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 OR2G2Q8NGZ5 317 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 MALSU1Q96EH3 234 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 PIGQQ9BRB3 760 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 TIMM29Q9BSF4 260 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 HCAR1Q9BXC0 346 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 SIRT3Q9NTG7 399 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-203ENST00000375315 POT1Q9NUX5 634 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 A0A087X0M5 115 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1B0GX30 115 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 IDSB3KWA1 339 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 F8VVB4 439 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 F8VWA3 439 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 KLF4O43474 513 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 CDX1P47902 265 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ATP1B3P54709 279 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 PKIAP61925 76 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 OR7A5Q15622 319 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 MBOAT2Q6ZWT7 520 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 LSRQ86X29 649 aaPredicted RBP11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ANGPTL5Q86XS5 388 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 SLC37A2Q8TED4 501 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.65
C9orf3-203ENST00000375315 SEC22AQ96IW7 307 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 MICU1Q9BPX6 476 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 SULT4A1Q9BR01 284 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 OR52D1Q9H346 318 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 PRDM13Q9H4Q3 707 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 SYNPO2LQ9H987 977 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 ADGRL4Q9HBW9 690 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 PARPBPQ9NWS1 579 aa11.02□□□□□ -0.65
C9orf3-203ENST00000375315 USP36Q9P275 1121 aaKnown RBP11.02□□□□□ -0.65
C9orf3-203ENST00000375315 A0A0A6YYC8 382 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 IGKV1-8A0A0C4DH67 115 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 hCG_1809904A0A1W2PP81 198 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1W2PPH5 198 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1W2PR64 198 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1W2PRV1 198 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 CXorf65A6NEN9 183 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 STMND1H3BQB6 276 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 I3L1I5 382 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 C8orf89P0DMQ9 161 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 EDNRAP25101 427 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 KHKP50053 298 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 RGS8P57771 180 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 SIRPAP78324 504 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 FZD2Q14332 565 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 NUBPLQ8TB37 319 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 CHST5Q9GZS9 411 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 AHSPQ9NZD4 102 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 COLEC10Q9Y6Z7 277 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 A0A1W2PPC4 97 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 FRS3O43559 492 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ERAL1O75616 437 aaKnown RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ITGB2P05107 769 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 COX5BP10606 129 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 DHPSP49366 369 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 RPS11P62280 158 aaKnown RBP eCLIP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ACTA2P62736 377 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 RPS15P62841 145 aaKnown RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 SNRPNP63162 240 aaKnown RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ACTG2P63267 376 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 LIPNQ5VXI9 398 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms