RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 METTL12A8MUP2 240 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 SOX1O00570 391 aaPredicted RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 PGCP20142 388 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 DCAF12L2Q5VW00 463 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 CORO6Q6QEF8 472 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 COPS7AQ9UBW8 275 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 EMC9Q9Y3B6 208 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 HRH3Q9Y5N1 445 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 COL6A3P12111 3177 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 IGHV1OR21-1A0A087WYE8 117 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 NPIPB7O75200 414 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 IGFBP4P22692 258 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 MRPS10P82664 201 aaKnown RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 SMAD2Q15796 467 aaKnown RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 RAB11BQ15907 218 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC18B1Q6NT16 456 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 OR1N1Q8NGS0 311 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 ASB5Q8WWX0 329 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 FOXQ1Q9C009 403 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 UCK1Q9HA47 277 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF275Q9NSD4 429 aaPredicted RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 UBQLN2Q9UHD9 624 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 ATXN7L1Q9ULK2 861 aaPredicted RBP13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 VDAC3Q9Y277 283 aa13.99□□□□□ -0.17
TMEM50A-201ENST00000374358 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 TEX46H3BTG2 121 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 EIF1AYO14602 144 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 SPOCK1Q08629 439 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 OPCMLQ14982 345 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 GLYATL3Q5SZD4 288 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 B3GNTL1Q67FW5 361 aaPredicted RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 TMEM225Q6GV28 225 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC29A4Q7RTT9 530 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 CDH24Q86UP0 819 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 RNF128Q8TEB7 428 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 SFXN2Q96NB2 322 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 MRI1Q9BV20 369 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 TXNIPQ9H3M7 391 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC2A4RGQ9NR83 387 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 MED29Q9NX70 200 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 DHDHQ9UQ10 334 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 POM121CA8CG34 1229 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 PLPP3O14495 311 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ARPC5O15511 151 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 IFNA7P01567 189 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF35P13682 527 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 POLR2HP52434 150 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 FBXW4P57775 412 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 UBXN2BQ14CS0 331 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 DNM1P46Q6ZS02 220 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 MUC20Q8N307 709 aaPredicted RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 TTC9Q92623 222 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 DAZLQ92904 295 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 EMC3Q9P0I2 261 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 MRPS18BQ9Y676 258 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 PHF3Q92576 2039 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 A0A1B0GTQ1 180 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 PLSCR5A0PG75 271 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 M0QYG6 137 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ADAM10O14672 748 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 TPD52L2O43399 206 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF432O94892 652 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 LDOC1O95751 146 aaPredicted RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 OPN1LWP04000 364 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 RBMS2Q15434 407 aaKnown RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 MOGAT2Q3SYC2 334 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF627Q7L945 461 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ANGPTL6Q8NI99 470 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 NUDT22Q9BRQ3 303 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF576Q9H609 170 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 C12orf10Q9HB07 376 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 RABL2AQ9UBK7 228 aaPredicted RBP13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 EPHA6Q9UF33 1036 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 RABL2BQ9UNT1 228 aa13.98□□□□□ -0.17
TMEM50A-201ENST00000374358 CELSR3Q9NYQ7 3312 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 OR2M5A3KFT3 312 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 A8MVM7 634 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC17A2O00624 439 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 GOSR2O14653 212 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 FADS1O60427 444 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 CPN1P15169 458 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 MNDAP41218 407 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 EIF1AXP47813 144 aaKnown RBP13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 HNRNPKP61978 463 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■■■□ 19.6
TMEM50A-201ENST00000374358 TEX30Q5JUR7 227 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 LRFN4Q6PJG9 635 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 ARSKQ6UWY0 536 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC36A1Q7Z2H8 476 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 SUN5Q8TC36 379 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 SLC25A44Q96H78 314 aaPredicted RBP13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 MTCH2Q9Y6C9 303 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 LOC100289279A0A1B0GTE1 492 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 EIF4E2O60573 245 aaKnown RBP13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 ZNF217O75362 1048 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 DXOO77932 396 aaKnown RBP13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 PDGFAP04085 211 aa13.97□□□□□ -0.17
TMEM50A-201ENST00000374358 ARRB1P49407 418 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms