RNA–Protein interactions for RNA: ENST00000366976.3

NSL1-201, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

TSL 2 BASIC

Gene NSL1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-201ENST00000366976 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
NSL1-201ENST00000366976 CCNB1IP1Q9NPC3 277 aa13.4□□□□□ -0.26
NSL1-201ENST00000366976 VSX1Q9NZR4 365 aaPredicted RBP13.4□□□□□ -0.26
NSL1-201ENST00000366976 HIVEP2P31629 2446 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 IGLV3-9A0A075B6K5 115 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 C12orf71A8MTZ7 269 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 H3BSA7 217 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 SMAD7O15105 426 aaKnown RBP13.39□□□□□ -0.27
NSL1-201ENST00000366976 FPR3P25089 353 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 GPR4P46093 362 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 RPS6KA3P51812 740 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 UCP2P55851 309 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 MYBPC1Q00872 1141 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 LCN8Q6JVE9 175 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 RPL13AP3Q6NVV1 102 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 C1orf94Q6P1W5 598 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 PGM2L1Q6PCE3 622 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 SMARCD3Q6STE5 483 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 IPCEF1Q8WWN9 437 aaPredicted RBP13.39□□□□□ -0.27
NSL1-201ENST00000366976 SORCS2Q96PQ0 1159 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 MDFIQ99750 246 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 TMCC3Q9ULS5 477 aa13.39□□□□□ -0.27
NSL1-201ENST00000366976 CSPG4Q6UVK1 2322 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 IGHV4-30-2A0A087WSY4 118 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 TEX13CA0A0J9YWL9 993 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 UNC119BA6NIH7 251 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 CD5LO43866 347 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 SLC2A10O95528 541 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 TP53P04637 393 aaPredicted RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 T-ENOLP0DO92 83 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ZNF26P17031 533 aaPredicted RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 MSR1P21757 451 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 APLNRP35414 380 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 ERVK-25P63136 954 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 SEC23BQ15437 767 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 KCNMB1Q16558 191 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 RFX4Q33E94 735 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 FAM209AQ5JX71 171 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 KRT80Q6KB66 452 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 VHLLQ6RSH7 139 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ARL9Q6T311 187 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ZER1Q7Z7L7 766 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ZDHHC21Q8IVQ6 265 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ZNF786Q8N393 782 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 C11orf40Q8WZ69 217 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 FAM46AQ96IP4 442 aaKnown RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 POM121L2Q96KW2 1035 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ZNF570Q96NI8 536 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 VRK1Q99986 396 aaPredicted RBP13.38□□□□□ -0.27
NSL1-201ENST00000366976 CDH20Q9HBT6 801 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 NKIRAS2Q9NYR9 191 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
NSL1-201ENST00000366976 IGKV1D-43A0A0B4J1Z2 117 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 M0R233 179 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 ZNF32P17041 273 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 STOMP27105 288 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 CRABP1P29762 137 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 GSSP48637 474 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 HSF2Q03933 536 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 FMODQ06828 376 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 KRTAP1-1Q07627 177 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 TRAP1Q12931 704 aaKnown RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 TSPAN31Q12999 210 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 TOP3AQ13472 1001 aaPredicted RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 SGCAQ16586 387 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 PABPC1L2AQ5JQF8 200 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 UGT2A3Q6UWM9 527 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 DHFR2Q86XF0 187 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 SVOPLQ8N434 492 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 CPEB3Q8NE35 698 aaKnown RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 ASB9Q96DX5 294 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 Q96M85 177 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 PIMREGQ9BSJ6 248 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 MRPL37Q9BZE1 423 aaKnown RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 TMEM160Q9NX00 188 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 TAS2R1Q9NYW7 299 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 REV1Q9UBZ9 1251 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 NDRG4Q9ULP0 352 aaKnown RBP13.37□□□□□ -0.27
NSL1-201ENST00000366976 ADAM18Q9Y3Q7 739 aa13.37□□□□□ -0.27
NSL1-201ENST00000366976 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
NSL1-201ENST00000366976 J3QW42 95 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 KHDRBS3O75525 346 aaKnown RBP13.36□□□□□ -0.27
NSL1-201ENST00000366976 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
NSL1-201ENST00000366976 LAP3P28838 519 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 SLC6A6P31641 620 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 CDAP32320 146 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 LIPAP38571 399 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 NR4A2P43354 598 aa13.36□□□□□ -0.27
NSL1-201ENST00000366976 FXYD6P3P58550 94 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms