RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 KLF9Q13886 244 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TCTE1Q5JU00 501 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 UBE2NLQ5JXB2 153 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 BCL2L15Q5TBC7 163 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 LEG1Q6P5S2 330 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 FAM199XQ6PEV8 388 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RAB11FIP2Q7L804 512 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 KRT74Q7RTS7 529 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLC35F3Q8IY50 421 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TOMM5Q8N4H5 51 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 METTL27Q8N6F8 245 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 OR6K6Q8NGW6 343 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 GRPEL2Q8TAA5 225 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 MRPL48Q96GC5 212 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLX1AQ9BQ83 275 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SPRTNQ9H040 489 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DPAGT1Q9H3H5 408 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 NOX4Q9NPH5 578 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF275Q9NSD4 429 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 MOKQ9UQ07 419 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLC6A5Q9Y345 797 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TDRD6O60522 2096 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 MUC3AQ02505 3323 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF503-AS2A6NEH8 195 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 IFITM5A6NNB3 132 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 BLOC1S5-TXNDC5H3BN57 136 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 UPK3AO75631 287 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 H2AFB1P0C5Y9 115 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 UBL4AP11441 157 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DPP4P27487 766 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 THBS4P35443 961 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RAG2P55895 527 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ELOCQ15369 112 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLC16A9Q7RTY1 509 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 CMTM4Q8IZR5 234 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 GATSQ8NAP1 163 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 LGALS14Q8TCE9 139 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SMIM4Q8WVI0 70 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ADAMTS14Q8WXS8 1223 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ADIPOR1Q96A54 375 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DNAJA3Q96EY1 480 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 GNRHR2Q96P88 292 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DERL3Q96Q80 235 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 C7orf50Q9BRJ6 194 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 NUDT15Q9NV35 164 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLCO1C1Q9NYB5 712 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 COPZ2Q9P299 210 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RABL2AQ9UBK7 228 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 CLEC4AQ9UMR7 237 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RABL2BQ9UNT1 228 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 THADAQ6YHU6 1953 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TRAV6A0A075B6T7 132 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 A0A1W2PR77 199 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 AIPO00170 330 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF264O43296 627 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DHFRP00374 187 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 IGKV3-11P04433 115 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ADRB1P08588 477 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 GFERP55789 205 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 MRPL28Q13084 256 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DYRK1AQ13627 763 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 FCN2Q15485 313 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ALG10Q5BKT4 473 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TIGD4Q8IY51 512 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 OR11H7Q8NGC8 314 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 DEDD2Q8WXF8 326 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 MSANTD3Q96H12 275 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZC3H10Q96K80 434 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 HYLS1Q96M11 299 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZFP3Q96NJ6 502 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 TSSK2Q96PF2 358 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 SLC38A3Q99624 504 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 KLHDC3Q9BQ90 382 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RAB33BQ9H082 229 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 NXF5Q9H1B4 397 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 C12orf10Q9HB07 376 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 PLEKHA1Q9HB21 404 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 NANSQ9NR45 359 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 RXFP3Q9NSD7 469 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF346Q9UL40 294 aaKnown RBP6.57□□□□□ -1.36
CLCN3-202ENST00000360642 ALPK2Q86TB3 2170 aa6.57□□□□□ -1.36
CLCN3-202ENST00000360642 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 IGHV1OR15-9A0A0B4J2B8 117 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 TRABD2BA6NFA1 517 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 TLCD2A6NGC4 264 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 FRG2CA6NGY1 282 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 DCTN6O00399 190 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 AKR7A2O43488 359 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 UTS2O95399 124 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF28P17035 718 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 GIFP27352 417 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 ARF1P84077 181 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 PRSS45Q7RTY3 260 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 RNF144BQ7Z419 303 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 GKN2Q86XP6 184 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 CDC20BQ86Y33 519 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 RLN3Q8WXF3 142 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms