RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM60AQ9NP50 221 aa5.96□□□□□ -1.45
CSDE1-203ENST00000358528 ACKR4Q9NPB9 350 aa5.96□□□□□ -1.45
CSDE1-203ENST00000358528 KCNMB2Q9Y691 235 aa5.96□□□□□ -1.45
CSDE1-203ENST00000358528 UNC13CQ8NB66 2214 aa5.96□□□□□ -1.45
CSDE1-203ENST00000358528 A0A087WUJ7 227 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM269A0A1B0GVZ9 245 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PRR32B1ATL7 298 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 NPIPA5E9PKD4 350 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF264O43296 627 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 KCNJ13O60928 360 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 AHSA1O95433 338 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 IL5P05113 134 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 HOXB5P09067 269 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF20P17024 532 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 SDHAP31040 664 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF273Q14593 569 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 SLC35D3Q5M8T2 416 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ELFN2Q5R3F8 820 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 EID2Q8N6I1 236 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 OR13C9Q8NGT0 318 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 RGP1Q92546 391 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PHYHIPQ92561 330 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PNPLA2Q96AD5 504 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 AMELYQ99218 206 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 OR11A1Q9GZK7 315 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 HAO2Q9NYQ3 351 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PRR13Q9NZ81 148 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 NPIPA1Q9UND3 350 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 VDAC3Q9Y277 283 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 MFSD2BA6NFX1 497 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF878C9JN71 531 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 M0R036 132 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 OIP5O43482 229 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 HCRTR1O43613 425 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 MPZL1O95297 269 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ITGA5P08648 1049 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PNMTP11086 282 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 SLC2A1P11166 492 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CTRB1P17538 263 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 HNRNPA2B1P22626 353 aaKnown RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 AKR1C3P42330 323 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZP2Q05996 745 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CHAF1BQ13112 559 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 SNTB1Q13884 538 aaKnown RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 RBM39Q14498 530 aaKnown RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CLVS2Q5SYC1 327 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 ZNF660Q6AZW8 331 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 AWAT2Q6E213 333 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CTRB2Q6GPI1 263 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 NUP54Q7Z3B4 507 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CBLN2Q8IUK8 224 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 GVQW1Q8N7I0 195 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 OR5D18Q8NGL1 313 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 FOXRED1Q96CU9 486 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 DCBLD2Q96PD2 775 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 MAP3K3Q99759 626 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 MRI1Q9BV20 369 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 PLA2G2FQ9BZM2 168 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 CHMP1AQ9HD42 196 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 NPDC1Q9NQX5 325 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-203ENST00000358528 UBQLN4Q9NRR5 601 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 B9D1Q9UPM9 204 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 HEATR5AQ86XA9 2040 aa5.96□□□□□ -1.46
CSDE1-203ENST00000358528 A0A087WV62 115 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 A0A0D9SG52 128 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CTDSPLO15194 276 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 NKX2-2O95096 273 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PMS2P2O95744 297 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CELA2BP08218 269 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 RAB3AP20336 220 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 HSD11B1P28845 292 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PLCXD2Q0VAA5 305 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 FAM76BQ5HYJ3 339 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 H3F3CQ6NXT2 135 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM71Q6P5X7 295 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PARM1Q6UWI2 310 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 TMEM151BQ8IW70 566 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 C7orf61Q8IZ16 206 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR51A2Q8NGJ7 313 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR5M9Q8NGP3 310 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 OR1S2Q8NGQ3 325 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 HAVCR2Q8TDQ0 301 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 MARC2Q969Z3 335 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 FGGYQ96C11 551 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 FAM71F1Q96KD3 344 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 GFI1Q99684 422 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PELOQ9BRX2 385 aaKnown RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 ST6GALNAC5Q9BVH7 336 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 LYRM4Q9HD34 91 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 PRODH2Q9UF12 536 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 CYP8B1Q9UNU6 501 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 COA3Q9Y2R0 106 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-203ENST00000358528 COL4A6Q14031 1691 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 UNC80Q8N2C7 3258 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 TCRBV21S2A2A0A5A6 115 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 LINC01553A4QN01 128 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 EFCAB7A8K855 629 aa5.95□□□□□ -1.46
CSDE1-203ENST00000358528 UTS2O95399 124 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms