RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PRR32B1ATL7 298 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PRRT4C9JH25 899 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 SIGLEC5O15389 551 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF10P21506 573 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 CYCSP99999 105 aaKnown RBP9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PDZK1IP1Q13113 114 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 PEA15Q15121 130 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 FCRL6Q6DN72 434 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 DBX2Q6ZNG2 339 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 BAP18Q8IXM2 172 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 OR1J2Q8NGS2 313 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 OR2G2Q8NGZ5 317 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 GRHL3Q8TE85 626 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 SMCO4Q9NRQ5 59 aa9.64□□□□□ -0.87
CAPN3-205ENST00000357568 TRAV8-7A0A075B6U6 113 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 URADA6NGE7 173 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 M0R296 226 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 SSX5O60225 188 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ACTL6AO96019 429 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 CD14P08571 375 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 FSTP19883 344 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 KIR2DL1P43626 348 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF234Q14588 700 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 TAF13Q15543 124 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 HMGN3Q15651 99 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 OR6K6Q8NGW6 343 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ZNRF4Q8WWF5 429 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 SGK3Q96BR1 496 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 Q96M85 177 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 NMNAT3Q96T66 252 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 PHB2Q99623 299 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 TLNRD1Q9H1K6 362 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 KIR3DX1Q9H7L2 352 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 RCC2Q9P258 522 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 METTL1Q9UBP6 276 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF230Q9UIE0 474 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 NOP16Q9Y3C1 178 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 SLC22A7Q9Y694 548 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 A0A087WUJ7 227 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 COLCA2A8K830 154 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 LINC00587B1AMM8 73 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 IDSB3KWA1 339 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 EIF1BO60739 113 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 LYL1P12980 280 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 PTAFRP25105 342 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 RPL4P36578 427 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 EIF1P41567 113 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 CX3CR1P49238 355 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 C2orf76Q3KRA6 126 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 NUP54Q7Z3B4 507 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 OR51D1Q8NGF3 324 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 OR52E1Q8NGJ3 308 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 OR51L1Q8NGJ5 315 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 OIT3Q8WWZ8 545 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 TM4SF19Q96DZ7 209 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ADAD1Q96M93 576 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 DCBLD2Q96PD2 775 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 CMSS1Q9BQ75 279 aaKnown RBP9.63□□□□□ -0.87
CAPN3-205ENST00000357568 NRIP2Q9BQI9 281 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 NMES1Q9C002 83 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 FBRSQ9HAH7 460 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 LMAN1LQ9HAT1 526 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ACKR4Q9NPB9 350 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 GSN-AS1Q9NRJ2 163 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 ASH2LQ9UBL3 628 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 HEBP2Q9Y5Z4 205 aa9.63□□□□□ -0.87
CAPN3-205ENST00000357568 TVP23AA6NH52 213 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF736B4DX44 427 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SGCEO43556 437 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 B3GALT2O43825 422 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 CYB5AP00167 134 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 AMY2AP04746 511 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 OR8G3PP0DMU2 310 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TBPP20226 339 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 PEBP1P30086 187 aaKnown RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 PTGFRP43088 359 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 KCNJ3P48549 501 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 EFNB2P52799 333 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 PLA2G7Q13093 441 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 HABP2Q14520 560 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 NR0B2Q15466 257 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF141Q15928 474 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 PRAMEF17Q5VTA0 474 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TMEM71Q6P5X7 295 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 VN1R4Q7Z5H5 301 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 OR4K17Q8NGC6 315 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 OR13C8Q8NGS7 320 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TMEM106AQ96A25 262 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 FOXRED1Q96CU9 486 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SLC41A2Q96JW4 573 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF587Q96SQ5 575 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 GABRG3Q99928 467 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 MACROD1Q9BQ69 325 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 LMF2Q9BU23 707 aaKnown RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SLC17A9Q9BYT1 436 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TINAGQ9UJW2 476 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms