RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZNF230Q9UIE0 474 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 LOC100289279A0A1B0GTE1 492 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 AQP8O94778 261 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 NTF3P20783 257 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CD38P28907 300 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CRMP1Q14194 572 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ADGRE4PQ86SQ3 457 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 GHSRQ92847 366 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 DVL3Q92997 716 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC6A18Q96N87 628 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ZMAT3Q9HA38 289 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CHST11Q9NPF2 352 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 PAPLNO95428 1278 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 IGHV3-9P01782 118 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 OR8G3PP0DMU2 310 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 GABRB1P18505 474 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CD68P34810 354 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC35D3Q5M8T2 416 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 NANOGP1Q8N7R0 232 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5M1Q8NGP8 315 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 UBTD2Q8WUN7 234 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 HLA-CQ95604 372 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 UCN3Q969E3 161 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 THOC3Q96J01 351 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ARRDC5A6NEK1 342 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 TIMP1P01033 207 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CPEP16870 476 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 NAXDQ8IW45 347 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 AKR1E2Q96JD6 320 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF251Q9BRH9 671 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 GABARAPL3Q9BY60 117 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CT45A10P0DMU9 189 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SUB1P53999 127 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 CORO2AQ92828 525 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SOX7Q9BT81 388 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SNRPBP14678 240 aaKnown RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF133P52736 654 aaPredicted RBP10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC35A1P78382 337 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 MAMDC4Q6UXC1 1216 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 ADGRG3Q86Y34 549 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 OR14A16Q8NHC5 309 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 APH1AQ96BI3 265 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 C3orf30Q96M34 536 aa10.6□□□□□ -0.71
SPTBN1-202ENST00000356805 TRAV20A0A0B4J274 112 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 OR8G1Q15617 311 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 MLF2Q15773 248 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SAXO2Q658L1 398 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 CPXM2Q8N436 756 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SFT2D1Q8WV19 159 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 FPR3P25089 353 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 GPR85P60893 370 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SYT9Q86SS6 491 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 TMEM130Q8N3G9 435 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5B3Q8NH48 314 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 TTC9Q92623 222 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 MAP6Q96JE9 813 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 AMBRA1Q9C0C7 1298 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 P2RY10O00398 339 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 H2AFB1P0C5Y9 115 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 GABREP78334 506 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 MARCH8Q5T0T0 291 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 MFSD12Q6NUT3 480 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 TIMD4Q96H15 378 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 C1QTNF6Q9BXI9 259 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 BARHL1Q9BZE3 327 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 EPHX3Q9H6B9 360 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 NOX4Q9NPH5 578 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 RGPD5Q99666 1765 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 HSPB2A8KAH6 182 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 ABCD4O14678 606 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 GPX2P18283 190 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 HSPB2Q16082 182 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 PLEKHA2Q9HB19 425 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 TRBV4-1A0A0J9YWV2 114 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 I6L893 689 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 M1APQ8TC57 530 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 ADH4P08319 380 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 OR2G6Q5TZ20 316 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 MBOAT2Q6ZWT7 520 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 ZADH2Q8N4Q0 377 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5K3A6NET4 321 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 LGI1O95970 557 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 NAT6Q93015 286 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 PHYHIPLQ96FC7 376 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 SNX11Q9Y5W9 270 aa10.59□□□□□ -0.71
SPTBN1-202ENST00000356805 IGHV3-64DA0A0J9YX35 117 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 GALR3O60755 368 aaPredicted RBP10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 GASTP01350 101 aa10.58□□□□□ -0.72
SPTBN1-202ENST00000356805 IAH1Q2TAA2 248 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms