RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 GUCA1AP43080 201 aaPredicted RBP19.33■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF83P51522 516 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 MEP1BQ16820 701 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 LYPD4Q6UWN0 246 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 SLC16A14Q7RTX9 510 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 TCEANCQ8N8B7 351 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 BBS1Q8NFJ9 593 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 FBXO17Q96EF6 278 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 HRASLS5Q96KN8 279 aa19.33■□□□□ 0.68
SHMT1-203ENST00000354098 TLX2O43763 284 aaPredicted RBP19.32■□□□□ 0.68
SHMT1-203ENST00000354098 MSR1P21757 451 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 ENDOGQ14249 297 aaKnown RBP19.32■□□□□ 0.68
SHMT1-203ENST00000354098 BCDIN3DQ7Z5W3 292 aaKnown RBP19.32■□□□□ 0.68
SHMT1-203ENST00000354098 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.32■□□□□ 0.68
SHMT1-203ENST00000354098 MDP1Q86V88 176 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 CCDC36Q8IYA8 594 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF295-AS1Q8N0V1 137 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 C11orf40Q8WZ69 217 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 UBE2FQ969M7 185 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 IL4I1Q96RQ9 567 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF416Q9BWM5 594 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 OR51V1Q9H2C8 321 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 C8orf4Q9NR00 106 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 FAM118AQ9NWS6 357 aa19.32■□□□□ 0.68
SHMT1-203ENST00000354098 PKDREJQ9NTG1 2253 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 DEFB108AA8MXU0 73 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 TFP02787 698 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 PAICSP22234 425 aaKnown RBP19.31■□□□□ 0.68
SHMT1-203ENST00000354098 RAB1AP62820 205 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 GLO1Q04760 184 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 DAZAP2Q15038 168 aaPredicted RBP19.31■□□□□ 0.68
SHMT1-203ENST00000354098 GSG1Q2KHT4 349 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 CXXC5Q7LFL8 322 aaKnown RBP19.31■□□□□ 0.68
SHMT1-203ENST00000354098 SLC26A10Q8NG04 563 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 PRRG3Q9BZD7 231 aa19.31■□□□□ 0.68
SHMT1-203ENST00000354098 TVP23AA6NH52 213 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 HLA-DQA2P01906 255 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 GGT2P36268 569 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 PTDSS1P48651 473 aaKnown RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 HSF2Q03933 536 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 LINC01590Q5TEZ4 76 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 MYPOPQ86VE0 399 aaPredicted RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 TMEM163Q8TC26 289 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF75AQ96N20 296 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 RDH12Q96NR8 316 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 MRPL22Q9NWU5 206 aaKnown RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 NDRG4Q9ULP0 352 aaKnown RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 DPRXA6NFQ7 191 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 A6NNC1 897 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 M0R1B8 84 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 UBL3O95164 117 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 CELA3BP08861 270 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 CST2P09228 141 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 MMP7P09237 267 aaPredicted RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 CBR1P16152 277 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 KCNMB1Q16558 191 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 SLC36A2Q495M3 483 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 CRYBG3Q68DQ2 2970 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 B3GLCTQ6Y288 498 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 SSX8Q7RTT4 187 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF511Q8NB15 262 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 OR6K6Q8NGW6 343 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 FAM81AQ8TBF8 368 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 NANOS1Q8WY41 292 aaKnown RBP19.3■□□□□ 0.68
SHMT1-203ENST00000354098 MARVELD3Q96A59 401 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 PLPPR2Q96GM1 343 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 GMPPBQ9Y5P6 360 aa19.3■□□□□ 0.68
SHMT1-203ENST00000354098 LOC100130705A0A1B0GUX0 176 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 IGKV3-15P01624 115 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 ZNF32P17041 273 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 CDC42P60953 191 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 TEKQ02763 1124 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 KLHL12Q53G59 568 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 PIK3IP1Q96FE7 263 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 MS4A3Q96HJ5 214 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 HS3ST6Q96QI5 342 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 PITX2Q99697 317 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 KCNN2Q9H2S1 579 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 RNF121Q9H920 327 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 NGBQ9NPG2 151 aa19.29■□□□□ 0.68
SHMT1-203ENST00000354098 CRNNQ9UBG3 495 aaPredicted RBP19.29■□□□□ 0.68
SHMT1-203ENST00000354098 NBPF19A0A087WUL8 3843 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 IGHV1-18A0A0C4DH31 117 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 SLC2A5P22732 501 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 LOXP28300 417 aaPredicted RBP19.28■□□□□ 0.68
SHMT1-203ENST00000354098 IDH3GP51553 393 aaPredicted RBP19.28■□□□□ 0.68
SHMT1-203ENST00000354098 BSPH1Q075Z2 132 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 C1QTNF12Q5T7M4 302 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 WDR76Q9H967 626 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 CCNB1IP1Q9NPC3 277 aa19.28■□□□□ 0.68
SHMT1-203ENST00000354098 SLC16A6O15403 523 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 IGLV1-44P01699 117 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 ARR3P36575 388 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 LSM6P62312 80 aaKnown RBP19.27■□□□□ 0.68
SHMT1-203ENST00000354098 RAB39AQ14964 217 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 BEX5Q5H9J7 111 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 NCMAPQ5T1S8 102 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 ASH2LQ9UBL3 628 aa19.27■□□□□ 0.68
SHMT1-203ENST00000354098 DCHS2Q6V1P9 2916 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms