RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 NDFIP1Q9BT67 221 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 HRASLSQ9HDD0 168 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 TREM2Q9NZC2 230 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 GBF1Q92538 1859 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 IFITM5A6NNB3 132 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ACHEP22303 614 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SLC6A1P30531 599 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ECH1Q13011 328 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 RANBP10Q6VN20 620 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF516Q92618 1163 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ADGRG7Q96K78 797 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 NOSIPQ9Y314 301 aaKnown RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 BCL9O00512 1426 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 RRP8O43159 456 aaKnown RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 NDUFB6O95139 128 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 IHHQ14623 411 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 IL20RAQ9UHF4 553 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 SMN1Q16637 294 aaKnown RBP11.64□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF583Q96ND8 569 aa11.64□□□□□ -0.55
COL6A3-203ENST00000353578 MPPED1O15442 326 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 AKR7A2O43488 359 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MT-ATP6P00846 226 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TNFSF4P23510 183 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 KIR2DL3P43628 341 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 PTPRCAPQ14761 206 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 LRP11Q86VZ4 500 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SLC25A19Q9HC21 320 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF541Q9H0D2 1346 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 PHF1O43189 567 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 HAND1O96004 215 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TNFP01375 233 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MRM1Q6IN84 353 aaKnown RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 DLL4Q9NR61 685 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 HES2Q9Y543 173 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 PTGDR2Q9Y5Y4 395 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ANKRD30BLA7E2S9 258 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SHC2P98077 582 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SYPL2Q5VXT5 272 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MAML2Q8IZL2 1156 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TOE1Q96GM8 510 aaKnown RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 HEMK1Q9Y5R4 338 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 H0YIV9 168 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SLC17A3O00476 420 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MBTPS2O43462 519 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SLC6A11P48066 632 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 DLX2Q07687 328 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 FCRL6Q6DN72 434 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 OR4N2Q8NGD1 307 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF845Q96IR2 970 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 CTSFQ9UBX1 484 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 CD84Q9UIB8 345 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 IL33O95760 270 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 OR3A1P47881 315 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 NPY4RP50391 375 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 LGALSLQ3ZCW2 172 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 CLCF1Q9UBD9 225 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 APC2O95996 2303 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 GASTP01350 101 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 CYC1P08574 325 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 FUT1P19526 365 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 OC90Q02509 493 aaPredicted RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MIDNQ504T8 468 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 DTX3Q8N9I9 347 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 UBXN10Q96LJ8 280 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TRBV4-1A0A0J9YWV2 114 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 FZD6O60353 706 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TAZQ16635 292 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 HYAL4Q2M3T9 481 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 POM121L1PQ3SYA9 428 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ZNF805Q5CZA5 627 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 RBMXL3Q8N7X1 1067 aaKnown RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 OR14C36Q8NHC7 312 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 FOXN4Q96NZ1 517 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 F5P12259 2224 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 MYBPHLA2RUH7 354 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SERPINE3A8MV23 424 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 SORBS2O94875 1100 aaKnown RBP11.63□□□□□ -0.55
COL6A3-203ENST00000353578 UBE2V2Q15819 145 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 TMEM241Q24JQ0 296 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 LANCL3Q6ZV70 420 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 CLDN19Q8N6F1 224 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
COL6A3-203ENST00000353578 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
COL6A3-203ENST00000353578 HOXA11P31270 313 aaPredicted RBP11.62□□□□□ -0.55
COL6A3-203ENST00000353578 SAPCD1Q5SSQ6 148 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 RHBDD3Q9Y3P4 386 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 NRASP01111 189 aa11.62□□□□□ -0.55
COL6A3-203ENST00000353578 HRASP01112 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms