RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SSPNQ14714 243 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 EXD3Q8N9H8 876 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 OR52N1Q8NH53 320 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 A0A1B0GV50 99 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 GOSR2O14653 212 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 FOXS1O43638 330 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 CDK4P11802 303 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 CLN3Q13286 438 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 GALEQ14376 348 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 CD226Q15762 336 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 COMTD1Q86VU5 262 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 OR2Y1Q8NGV0 311 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 FOXRED1Q96CU9 486 aaPredicted RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 LHX6Q9UPM6 363 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 A0A0B4J2E0 115 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 A0A1B0GX12 115 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 CYR61O00622 381 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 RPS19P39019 145 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 MAP2K6P52564 334 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 PSG6Q00889 435 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 AIMP2Q13155 320 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 GNMTQ14749 295 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 USP51Q70EK9 711 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 PHC2Q8IXK0 858 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 AKR7LQ8NHP1 331 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ARHGDIGQ99819 225 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 EHFQ9NZC4 300 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 CACNA1HO95180 2353 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ZNF701M0R085 212 aaPredicted RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 PCSK6P29122 969 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 MECP2P51608 486 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 DSCR4P56555 118 aaPredicted RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 TMEM81Q6P7N7 255 aa12.41□□□□□ -0.42
SMC6-201ENST00000351948 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
SMC6-201ENST00000351948 TRGV5A0A0B4J1U4 118 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 TRIM64A6NGJ6 449 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 EFSO43281 561 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 ACTL6BO94805 426 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 NXPH2O95156 264 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 SRMP19623 302 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 MEOX1P50221 254 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 ZNF74Q16587 644 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 TBC1D28Q2M2D7 210 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 SYT6Q5T7P8 510 aaPredicted RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 RAB12Q6IQ22 244 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 TPRA1Q86W33 373 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 GABARAPL1Q9H0R8 117 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 TAS2R4Q9NYW5 299 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 MGAT4AQ9UM21 535 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 KLK4Q9Y5K2 254 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 UBCP0CG48 685 aaKnown RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 IL2RGP31785 369 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 ARL6IP1Q15041 203 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 C1QL3Q5VWW1 255 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 ANGPTL5Q86XS5 388 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 OR4Q3Q8NH05 313 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 MNTQ99583 582 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 VRK1Q99986 396 aaPredicted RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 B3GNT2Q9NY97 397 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 FIGNL2A6NMB9 653 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 RIPPLY1Q0D2K3 151 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 IL10RAQ13651 578 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 SPATA46Q5T0L3 261 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 APOOLQ6UXV4 268 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 DVL3Q92997 716 aaPredicted RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 DUS3LQ96G46 650 aaKnown RBP12.4□□□□□ -0.42
SMC6-201ENST00000351948 RASL10BQ96S79 203 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 NIPAL2Q9H841 368 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 MMP25Q9NPA2 562 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 GPR160Q9UJ42 338 aa12.4□□□□□ -0.42
SMC6-201ENST00000351948 M0R135 149 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 TGM4P49221 684 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 TNK1Q13470 666 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 MPEG1Q2M385 716 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 COQ8AQ8NI60 647 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 GCDHQ92947 438 aaPredicted RBP12.4□□□□□ -0.43
SMC6-201ENST00000351948 RAB3CQ96E17 227 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 ZNF799Q96GE5 643 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 NKX3-1Q99801 234 aaPredicted RBP12.4□□□□□ -0.43
SMC6-201ENST00000351948 FAM173AQ9BQD7 235 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 MED18Q9BUE0 208 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 SLC19A3Q9BZV2 496 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 PAQR5Q9NXK6 330 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms