RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 C1QAP02745 245 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 RAB13P51153 203 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ZNF133P52736 654 aaPredicted RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 LIM2P55344 173 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 H3F3AP84243 136 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SSBP1Q04837 148 aaKnown RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 SCGB2A2Q13296 93 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 PHLDA2Q53GA4 152 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 IL34Q6ZMJ4 242 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
SPAST-202ENST00000345662 DUSP18Q8NEJ0 188 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ABHD6Q9BV23 337 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ULBP2Q9BZM5 246 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 TMEM202A6NGA9 273 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 IGLV3-25P01717 112 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 BAXQ07812 192 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ARHGAP11BQ3KRB8 267 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 CYHR1Q6ZMK1 362 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SEH1LQ96EE3 360 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SDF2Q99470 211 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 PYCARD-AS1I3L0S3 204 aa16■□□□□ 0.15
SPAST-202ENST00000345662 SOCS7O14512 581 aa16■□□□□ 0.15
SPAST-202ENST00000345662 OPN1LWP04000 364 aa16■□□□□ 0.15
SPAST-202ENST00000345662 SLC35E2P0CK97 266 aa16■□□□□ 0.15
SPAST-202ENST00000345662 DUSP1P28562 367 aa16■□□□□ 0.15
SPAST-202ENST00000345662 GPR85P60893 370 aa16■□□□□ 0.15
SPAST-202ENST00000345662 UBE2NP61088 152 aaKnown RBP16■□□□□ 0.15
SPAST-202ENST00000345662 MORN1Q5T089 497 aa16■□□□□ 0.15
SPAST-202ENST00000345662 SLC6A17Q9H1V8 727 aa16■□□□□ 0.15
SPAST-202ENST00000345662 PDFQ9HBH1 243 aa16■□□□□ 0.15
SPAST-202ENST00000345662 KLF15Q9UIH9 416 aa16■□□□□ 0.15
SPAST-202ENST00000345662 ANKRD61A6NGH8 418 aa16■□□□□ 0.15
SPAST-202ENST00000345662 H3BQ06 376 aaPredicted RBP16■□□□□ 0.15
SPAST-202ENST00000345662 CTSLP07711 333 aa16■□□□□ 0.15
SPAST-202ENST00000345662 TMEM31Q5JXX7 168 aa16■□□□□ 0.15
SPAST-202ENST00000345662 OR52W1Q6IF63 320 aa16■□□□□ 0.15
SPAST-202ENST00000345662 DCXRQ7Z4W1 244 aa16■□□□□ 0.15
SPAST-202ENST00000345662 GCDHQ92947 438 aaPredicted RBP16■□□□□ 0.15
SPAST-202ENST00000345662 DERL3Q96Q80 235 aa16■□□□□ 0.15
SPAST-202ENST00000345662 PLEKHA2Q9HB19 425 aa16■□□□□ 0.15
SPAST-202ENST00000345662 ZMAT5Q9UDW3 170 aaKnown RBP16■□□□□ 0.15
SPAST-202ENST00000345662 A0A1B0GUL6 1792 aa16■□□□□ 0.15
SPAST-202ENST00000345662 MCRIP1C9JLW8 97 aa16■□□□□ 0.15
SPAST-202ENST00000345662 MAP2K6P52564 334 aa16■□□□□ 0.15
SPAST-202ENST00000345662 HAGHQ16775 308 aa16■□□□□ 0.15
SPAST-202ENST00000345662 C2orf76Q3KRA6 126 aa16■□□□□ 0.15
SPAST-202ENST00000345662 BPIFCQ8NFQ6 507 aa16■□□□□ 0.15
SPAST-202ENST00000345662 OR1J1Q8NGS3 322 aa16■□□□□ 0.15
SPAST-202ENST00000345662 PPP1R35Q8TAP8 253 aa16■□□□□ 0.15
SPAST-202ENST00000345662 HMGCLL1Q8TB92 370 aa16■□□□□ 0.15
SPAST-202ENST00000345662 SLC35A4Q96G79 324 aa16■□□□□ 0.15
SPAST-202ENST00000345662 SLC46A1Q96NT5 459 aa16■□□□□ 0.15
SPAST-202ENST00000345662 NKX3-1Q99801 234 aaPredicted RBP16■□□□□ 0.15
SPAST-202ENST00000345662 CDH20Q9HBT6 801 aa16■□□□□ 0.15
SPAST-202ENST00000345662 PRRC2BQ5JSZ5 2229 aaKnown RBP16■□□□□ 0.15
SPAST-202ENST00000345662 TMED7-TICAM2A0A0A6YYA0 188 aa16■□□□□ 0.15
SPAST-202ENST00000345662 TMED7Q9Y3B3 224 aa16■□□□□ 0.15
SPAST-202ENST00000345662 CLDN1O95832 211 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 NKX2-1P43699 371 aaPredicted RBP15.99■□□□□ 0.15
SPAST-202ENST00000345662 PCBD1P61457 104 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 CATR1Q13166 79 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 HNF4GQ14541 408 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 FAM199XQ6PEV8 388 aaPredicted RBP15.99■□□□□ 0.15
SPAST-202ENST00000345662 MED25Q71SY5 747 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 MSI2Q96DH6 328 aaKnown RBP15.99■□□□□ 0.15
SPAST-202ENST00000345662 GNPNAT1Q96EK6 184 aaPredicted RBP15.99■□□□□ 0.15
SPAST-202ENST00000345662 CMTM3Q96MX0 182 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 ARV1Q9H2C2 271 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 NKX2-4Q9H2Z4 354 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 RAB9BQ9NP90 201 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 ITGB8P26012 769 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 MEOX2P50222 304 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 ZP2Q05996 745 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 MFAP5Q13361 173 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 C11orf87Q6NUJ2 197 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 MSRB3Q8IXL7 192 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 PLK3Q9H4B4 646 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 ASH2LQ9UBL3 628 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 PRSS23O95084 383 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 JMJD7P0C870 316 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 TBPP20226 339 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 SDHAP31040 664 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 LOC107986453A0A1B0GWG9 222 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 CYB5BO43169 146 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 F10P00742 488 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 GALP22466 123 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 APLNRP35414 380 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 FAM209AQ5JX71 171 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 Q6ZSR6 202 aa15.99■□□□□ 0.15
SPAST-202ENST00000345662 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.99■□□□□ 0.15
SPAST-202ENST00000345662 CCDC85CA6NKD9 419 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 XRCC3O43542 346 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 UTS2O95399 124 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 CD79AP11912 226 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 CCL5P13501 91 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 SNRPEP62304 92 aaKnown RBP15.98■□□□□ 0.15
SPAST-202ENST00000345662 DUSP8Q13202 625 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 ZNF684Q5T5D7 378 aa15.98■□□□□ 0.15
SPAST-202ENST00000345662 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms