RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DOCK6Q96HP0 2047 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CLEC9AQ6UXN8 241 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CD99L2Q8TCZ2 262 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 SLC35D2Q76EJ3 337 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 HLA-CQ95604 372 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 DNAJA3Q96EY1 480 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 MTCH1Q9NZJ7 389 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 PKD1L3Q7Z443 1732 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 TRAV36DV7A0A075B6V5 113 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 TRAV20A0A0B4J274 112 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 ARHGAP11BQ3KRB8 267 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 OR51A4Q8NGJ6 313 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 ATOH8Q96SQ7 321 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 DLL4Q9NR61 685 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 YLPM1P49750 1951 aaKnown RBP17.87■□□□□ 0.45
HDAC4-201ENST00000345617 CADP27708 2225 aa17.87■□□□□ 0.45
HDAC4-201ENST00000345617 TXNDC12O95881 172 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 COX5AP20674 150 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 F2RP25116 425 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 EMG1Q92979 244 aaKnown RBP17.86■□□□□ 0.45
HDAC4-201ENST00000345617 SLC35E1Q96K37 410 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 TEX50A0A1B0GTY4 177 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GPR171O14626 319 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 ADAM11O75078 769 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 BMI1P35226 326 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 CGB2Q6NT52 195 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 MOB3CQ70IA8 216 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 OR52R1Q8NGF1 315 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 OR13D1Q8NGV5 346 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GLCEO94923 617 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GABRB1P18505 474 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 PIGLQ9Y2B2 252 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 CD14P08571 375 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 UBE2MP61081 183 aaKnown RBP17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GABREP78334 506 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 PINX1Q96BK5 328 aaKnown RBP17.86■□□□□ 0.45
HDAC4-201ENST00000345617 MMP26Q9NRE1 261 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 IL17CQ9P0M4 197 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 DNMT3BQ9UBC3 853 aaKnown RBP17.86■□□□□ 0.45
HDAC4-201ENST00000345617 BCL2L11O43521 198 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 SSSCA1O60232 199 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 OTX2P32243 289 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 TEX261Q6UWH6 196 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 OR5AR1Q8NGP9 310 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 U3KQ87 197 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF626Q68DY1 528 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 DUS3LQ96G46 650 aaKnown RBP17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GDE1Q9NZC3 331 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 RFPL4AA6NLU0 287 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 RFPL4AL1F8VTS6 287 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 SLC31A2O15432 143 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 FOXK2Q01167 660 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 GUK1Q16774 197 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 ESPNLQ6ZVH7 1005 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 NANOGP1Q8N7R0 232 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 MFSD9Q8NBP5 474 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 UCN3Q969E3 161 aa17.86■□□□□ 0.45
HDAC4-201ENST00000345617 NKX6-3A6NJ46 265 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF207O43670 478 aaKnown RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 MTHFD2P13995 350 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 PLXDC2Q6UX71 529 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 DTD2Q96FN9 168 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 FYTTD1Q96QD9 318 aaKnown RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 NAA50Q9GZZ1 169 aaKnown RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 BCO1Q9HAY6 547 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 MRPL33O75394 65 aaKnown RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 HOXA11P31270 313 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 GPX8Q8TED1 209 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 PHYHIPLQ96FC7 376 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 APEX1P27695 318 aaKnown RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 EGR3Q06889 387 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 FCRL6Q6DN72 434 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 OR5B3Q8NH48 314 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 SEMA4FO95754 770 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 C18orf21Q32NC0 220 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 CAPNS2Q96L46 248 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 CTDSP1Q9GZU7 261 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 KCNJ3P48549 501 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 DYNC2LI1Q8TCX1 351 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 STACQ99469 402 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 WTIPA6NIX2 430 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 ORM1P02763 201 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 GLAP06280 429 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 HEXAP06865 529 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 ACTL7AQ9Y615 435 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 FRS3O43559 492 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 FCER1GP30273 86 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 COL9A3Q14050 684 aaPredicted RBP17.85■□□□□ 0.45
HDAC4-201ENST00000345617 MANEAQ5SRI9 462 aa17.85■□□□□ 0.45
HDAC4-201ENST00000345617 MFAP5Q13361 173 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 PDZD11Q5EBL8 140 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 ZNF534Q76KX8 674 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 OR2AE1Q8NHA4 323 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 EDAQ92838 391 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 OR2A14Q96R47 310 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 ST8SIA5O15466 376 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 PLRG1O43660 514 aaKnown RBP17.84■□□□□ 0.45
HDAC4-201ENST00000345617 NME2P1O60361 137 aa17.84■□□□□ 0.45
HDAC4-201ENST00000345617 NXPH2O95156 264 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms