RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 SLC24A4Q8NFF2 622 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 SGPP1Q9BX95 441 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 CHST8Q9H2A9 424 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 MSRAQ9UJ68 235 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ACAD8Q9UKU7 415 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 FAM166BA8MTA8 275 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 F6UZH7 168 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 CRABP1P29762 137 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 TOE1Q96GM8 510 aaKnown RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 KCNIP1Q9NZI2 227 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 LPAR3Q9UBY5 353 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 TMEFF2Q9UIK5 374 aaPredicted RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 WNT1P04628 370 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 CEBPEQ15744 281 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 PRSS35Q8N3Z0 413 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 GATSQ8NAP1 163 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 COL22A1Q8NFW1 1626 aaPredicted RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 VGLL4Q14135 290 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 KCNG3Q8TAE7 436 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 IGSF8Q969P0 613 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 PLEKHA2Q9HB19 425 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 OSGIN2Q9Y236 505 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 PLRG1O43660 514 aaKnown RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 BTNL8Q6UX41 500 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 VITQ6UXI7 678 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 DAZAP1Q96EP5 407 aaKnown RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 ZNF558Q96NG5 402 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 ALPK3Q96L96 1907 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 SSSCA1O60232 199 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 MMP11P24347 488 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 LYSMD1Q96S90 227 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 EDN3P14138 238 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 Q6ZVU0 165 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 ASPGQ86U10 573 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 PNPLA1Q8N8W4 532 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 C1QTNF3Q9BXJ4 246 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 LNP1A1A4G5 178 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 FOXK2Q01167 660 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 MALLQ13021 153 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 SAT2Q96F10 170 aaPredicted RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 IGFBP1P08833 259 aaPredicted RBP12.56□□□□□ -0.4
TRIO-202ENST00000344204 SULT1A2P50226 295 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 FAM162BQ5T6X4 162 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 NCR3LG1Q68D85 454 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 ABCD4O14678 606 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 DSCR3O14972 297 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 THBS2P35442 1172 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 TMEM201Q5SNT2 666 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 SLC43A2Q8N370 569 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 TRAPPC1Q9Y5R8 145 aa12.56□□□□□ -0.4
TRIO-202ENST00000344204 IFITM5A6NNB3 132 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 HEXAP06865 529 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 FUT10Q6P4F1 479 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 C1QTNF6Q9BXI9 259 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OR8D2Q9GZM6 311 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 TRBV23-1A0A0A0MS06 115 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OPN1MWP04001 364 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 CXCL3P19876 107 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 CARD18P57730 90 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 RPS15AP62244 130 aaKnown RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 GCNT2Q8N0V5 402 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 PRAMEF27A3QJZ7 478 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZNF43P17038 809 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 LMNTD1Q8N9Z9 388 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 BTAF1O14981 1849 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 IER5LQ5T953 404 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 CTU1Q7Z7A3 348 aaKnown RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 HGDQ93099 445 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZNF331Q9NQX6 463 aaPredicted RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 GPR160Q9UJ42 338 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 SLC22A7Q9Y694 548 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 V9GYH0 126 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 GALP22466 123 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 HOXA9P31269 272 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 ZNF154Q13106 437 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 TRAV34A0A0B4J273 112 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OTOL1A6NHN0 477 aaPredicted RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 ITGB7P26010 798 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 SLC11A1P49279 550 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 OR5M9Q8NGP3 310 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 GPR55Q9Y2T6 319 aaPredicted RBP12.55□□□□□ -0.4
TRIO-202ENST00000344204 TSC2P49815 1807 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 PCDH15Q96QU1 1955 aa12.55□□□□□ -0.4
TRIO-202ENST00000344204 MMP2P08253 660 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms