RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SERPINE2P07093 398 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 CX3CR1P49238 355 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 EMDP50402 254 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 WNT3P56703 355 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 KIAA0040Q15053 153 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 Q3ZCU0 254 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 TMEM240Q5SV17 173 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 OR51S1Q8NGJ8 323 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 MIB2Q96AX9 1013 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 RSPRY1Q96DX4 576 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 CCNL2Q96S94 520 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-202ENST00000343090 TMEM59Q9BXS4 323 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
UBE4B-202ENST00000343090 RNF32Q9H0A6 362 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 LYRM4Q9HD34 91 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 ING1Q9UK53 422 aaPredicted RBP7.38□□□□□ -1.23
UBE4B-202ENST00000343090 SLC22A7Q9Y694 548 aa7.38□□□□□ -1.23
UBE4B-202ENST00000343090 PRAMEF27A3QJZ7 478 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF749O43361 778 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 AKR7A3O95154 331 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 MTCP1P56278 107 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 HTRA4P83105 476 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 RUNX2Q13950 521 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 KIAA0141Q14154 515 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PRAMEF9Q5VWM5 478 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CMTM1Q8IZ96 169 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 BATF2Q8N1L9 274 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 LINC00469Q8N7U9 141 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 BCORP1Q8N888 145 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 AKR7LQ8NHP1 331 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 TERB2Q8NHR7 220 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 GCDHQ92947 438 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 NRTNQ99748 197 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 NICN1Q9BSH3 213 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 C20orf24Q9BUV8 137 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 BARHL1Q9BZE3 327 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 DPM1O60762 260 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 EDN3P14138 238 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 RPS2P15880 293 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CHATP28329 748 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 APLNRP35414 380 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 HTR5AP47898 357 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 AFF3P51826 1226 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 HLXQ14774 488 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 LGALSLQ3ZCW2 172 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SFRP5Q5T4F7 317 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 AMER3Q8N944 861 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 BVESQ8NE79 360 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CMC2Q9NRP2 79 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 LRFN1Q9P244 771 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 DOCK1Q14185 1865 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 RAC2P15153 192 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 NQO2P16083 231 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SPI1P17947 270 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CXCL3P19876 107 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 NME2P22392 152 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PRPH2P23942 346 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 BLVRBP30043 206 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 OR2B8PP59922 312 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SSTP61278 116 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CNN3Q15417 329 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 AADACL4Q5VUY2 407 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 C1orf140Q5VVS0 124 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PTP4A1Q93096 173 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 TMEM68Q96MH6 324 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF251Q9BRH9 671 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PBX4Q9BYU1 374 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SEMA4CQ9C0C4 833 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 MIXL1Q9H2W2 232 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 TCEAL2Q9H3H9 227 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PLEKHB1Q9UF11 243 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 OR52A1Q9UKL2 312 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 IMPA2O14732 288 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 OR7C1O76099 320 aaPredicted RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CEACAM5P06731 702 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 ZNF44P15621 663 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 OMGP23515 440 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 CSF2RBP32927 897 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 RPS18P62269 152 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SNTB1Q13884 538 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 VWA2Q5GFL6 755 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 SHEQ5VZ18 495 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 FBXW12Q6X9E4 464 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 OR11H7Q8NGC8 314 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PIGTQ969N2 578 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 PAPOLGQ9BWT3 736 aaKnown RBP7.37□□□□□ -1.23
UBE4B-202ENST00000343090 POFUT1Q9H488 388 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 ISYNA1Q9NPH2 558 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 ACAD8Q9UKU7 415 aa7.37□□□□□ -1.23
UBE4B-202ENST00000343090 TLCD2A6NGC4 264 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 CXCL10P02778 98 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 ALDH3B1P43353 468 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 DUSP8Q13202 625 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 EBPQ15125 230 aaKnown RBP7.36□□□□□ -1.23
UBE4B-202ENST00000343090 ETFDHQ16134 617 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 OR11A1Q9GZK7 315 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 ENKD1Q9H0I2 346 aa7.36□□□□□ -1.23
UBE4B-202ENST00000343090 TSPAN10Q9H1Z9 355 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms