RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SPRED2Q7Z698 418 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ZSCAN4Q8NAM6 433 aaPredicted RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 CNTNAP3BQ96NU0 1288 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ABHD1Q96SE0 405 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 JAM3Q9BX67 310 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MMP25Q9NPA2 562 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 PRSS37A4D1T9 235 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 FCGR2AP12318 317 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RPS27AP62979 156 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 UBA52P62987 128 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 MRPL49Q13405 166 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 SLC17A1Q14916 467 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 BEND4Q6ZU67 534 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 GABRG1Q8N1C3 465 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 SCGB1C1Q8TD33 95 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CMSS1Q9BQ75 279 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 SCPEP1Q9HB40 452 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ASH2LQ9UBL3 628 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 NCOR1O75376 2440 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 TAF1LQ8IZX4 1826 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RAB5BP61020 215 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 SLC35A1P78382 337 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MC2RQ01718 297 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RIN1Q13671 783 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 C2orf76Q3KRA6 126 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 EXOSC6Q5RKV6 272 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 MRPL21Q7Z2W9 205 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 CCDC71LQ8N9Z2 235 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RBPMSQ93062 196 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 SPIN2AQ99865 258 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 SPIN2BQ9BPZ2 258 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 KCNS2Q9ULS6 477 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 B9D1Q9UPM9 204 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ZNF175Q9Y473 711 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 LILRB5O75023 590 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 LPLP06858 475 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ZNF14P17017 642 aaPredicted RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 NAGAP17050 411 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ATP1B3P54709 279 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 LRRC18Q8N456 261 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ST6GAL2Q96JF0 529 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MIXL1Q9H2W2 232 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 TXNIPQ9H3M7 391 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CDCP1Q9H5V8 836 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 QPCTLQ9NXS2 382 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 SLCO1C1Q9NYB5 712 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 PCM1Q15154 2024 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 OR6C68A6NDL8 312 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 PRAMEF25A6NGN4 478 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CT62P0C5K7 136 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CPT2P23786 658 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 EIF1P41567 113 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 MAGEB1P43366 347 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MMP15P51511 669 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 HSF1Q00613 529 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 NR0B2Q15466 257 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 ZNF74Q16587 644 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 PRTGQ2VWP7 1150 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 AAED1Q7RTV5 226 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 RHBDD1Q8TEB9 315 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 PTP4A1Q93096 173 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 MARVELD1Q9BSK0 173 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 HRH4Q9H3N8 390 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 FAM60AQ9NP50 221 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 DNAJB12Q9NXW2 375 aaKnown RBP6.54□□□□□ -1.36
VCAN-202ENST00000342785 WASF3Q9UPY6 502 aa6.54□□□□□ -1.36
VCAN-202ENST00000342785 CCSO14618 274 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF254O75437 659 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 COL9A1P20849 921 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 MSX1P28360 303 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 S100A2P29034 98 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 LUMP51884 338 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 PNLIPRP2P54317 469 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 RNLSQ5VYX0 342 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 UPRTQ96BW1 309 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 KTI12Q96EK9 354 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF681Q96N22 645 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SPACA5Q96QH8 159 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ABHD6Q9BV23 337 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 PBDC1Q9BVG4 233 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 EXOGQ9Y2C4 368 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 V9GYH0 126 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 A0A0B4J2A0 478 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 A0A1B0GUH1 482 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CBX7O95931 251 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SERPINE2P07093 398 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 APOBEC1P41238 236 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 NPY4RP50391 375 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 TAS2R46P59540 309 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 CNN3Q15417 329 aaKnown RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 SLC25A30Q5SVS4 291 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNF770Q6IQ21 691 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 C3orf33Q6P1S2 294 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SLC16A14Q7RTX9 510 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
VCAN-202ENST00000342785 MAFIPQ8WZ33 124 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 RNF32Q9H0A6 362 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 SHPKQ9UHJ6 478 aa6.53□□□□□ -1.36
VCAN-202ENST00000342785 ZNFX1Q9P2E3 1918 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms