RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 OOSP2Q86WS3 158 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 CDC20BQ86Y33 519 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 EID2Q8N6I1 236 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 GPR148Q8TDV2 347 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 NKD1Q969G9 470 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 MNTQ99583 582 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 RTN4RQ9BZR6 473 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 EXOSC3Q9NQT5 275 aaKnown RBP13.79□□□□□ -0.2
PERM1-201ENST00000341290 SLC39A1Q9NY26 324 aa13.79□□□□□ -0.2
PERM1-201ENST00000341290 CGGBP1Q9UFW8 167 aaPredicted RBP13.79□□□□□ -0.2
PERM1-201ENST00000341290 SSX5O60225 188 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 FAUP35544 74 aaKnown RBP13.78□□□□□ -0.2
PERM1-201ENST00000341290 S100A12P80511 92 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 TDGQ13569 410 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 ZNF660Q6AZW8 331 aaPredicted RBP13.78□□□□□ -0.2
PERM1-201ENST00000341290 RPS4Y2Q8TD47 263 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 SCARB1Q8WTV0 552 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 TAAR8Q969N4 342 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 FAM131CQ96AQ9 280 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 MMABQ96EY8 250 aaPredicted RBP13.78□□□□□ -0.2
PERM1-201ENST00000341290 LRFN5Q96NI6 719 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 SLC38A3Q99624 504 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 ELOVL3Q9HB03 270 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 MED11Q9P086 117 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 TRBV5-5A0A0J9YX44 114 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 CCSO14618 274 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 KCNAB3O43448 404 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 NUDT14O95848 222 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 PPP3CBP16298 524 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 IL10RAQ13651 578 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 TOMM34Q15785 309 aaPredicted RBP13.78□□□□□ -0.2
PERM1-201ENST00000341290 SCGB2B2Q4G0G5 96 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 OR1S1Q8NH92 325 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 FAM3DQ96BQ1 224 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 SEC22AQ96IW7 307 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 MICU1Q9BPX6 476 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 BCL2L14Q9BZR8 327 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 ETV7Q9Y603 341 aa13.78□□□□□ -0.2
PERM1-201ENST00000341290 DCDC2BA2VCK2 349 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 B4DGG1 531 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 SIGLEC6O43699 453 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 PRAMEF2O60811 474 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 WNT11O96014 354 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 PNPP00491 289 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 HNRNPA2B1P22626 353 aaKnown RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 TACR3P29371 465 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 GPR3P46089 330 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 MRPS10P82664 201 aaKnown RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 LIN54Q6MZP7 749 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 ZNF704Q6ZNC4 412 aaPredicted RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 MCATQ8IVS2 390 aaKnown RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 ZFP82Q8N141 532 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 EXD3Q8N9H8 876 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 PMM1Q92871 262 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 MRGPRX1Q96LB2 322 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 ADOQ96SZ5 270 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 PNO1Q9NRX1 252 aaKnown RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 TMEM184BQ9Y519 407 aaPredicted RBP13.77□□□□□ -0.2
PERM1-201ENST00000341290 BRWD1Q9NSI6 2320 aa13.77□□□□□ -0.2
PERM1-201ENST00000341290 CELSR3Q9NYQ7 3312 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 TRBV23-1A0A0A0MS06 115 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 FGF2P09038 288 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ALOX5APP20292 161 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 PRSS3P35030 304 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 NKPD1Q17RQ9 610 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ELP2Q6IA86 826 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ARMC6Q6NXE6 501 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ANKRD16Q6P6B7 361 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
PERM1-201ENST00000341290 SLC22A18ASQ8N1D0 253 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 GAL3ST4Q96RP7 486 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 INTS14Q96SY0 518 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 HIF3AQ9Y2N7 669 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 RAB19A4D1S5 217 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 SGCEO43556 437 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 SPARCP09486 303 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 RNH1P13489 461 aaKnown RBP13.77□□□□□ -0.21
PERM1-201ENST00000341290 DMWDQ09019 674 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 STEAP1BQ6NZ63 245 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 SLC16A13Q7RTY0 426 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 PDZD9Q8IXQ8 264 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 CCDC36Q8IYA8 594 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 GALNT16Q8N428 558 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 LRRC75AQ8NAA5 344 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 MRPS24Q96EL2 167 aaKnown RBP13.77□□□□□ -0.21
PERM1-201ENST00000341290 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
PERM1-201ENST00000341290 MRTO4Q9UKD2 239 aaKnown RBP13.77□□□□□ -0.21
PERM1-201ENST00000341290 FREM3P0C091 2139 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 ALOX12BO75342 701 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 CSF1P09603 554 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 AKAIN1P0CW23 69 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 HHEXQ03014 270 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 SERTAD2Q14140 314 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 SLC43A2Q8N370 569 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
PERM1-201ENST00000341290 OR8D2Q9GZM6 311 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 TWSG1Q9GZX9 223 aa13.76□□□□□ -0.21
PERM1-201ENST00000341290 SLC22A11Q9NSA0 550 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms