RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 BCL2L10Q9HD36 194 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 ASB6Q9NWX5 421 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 DBX1A6NMT0 343 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 C1orf196B1AJZ1 125 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 CLN5O75503 358 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 SOX30O94993 753 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 FGF5P12034 268 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 TRHRP34981 398 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-201ENST00000340611 THBS2P35442 1172 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 CDPF1Q6NVV7 123 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 SYT9Q86SS6 491 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 OR10H5Q8NGA6 315 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 SMAP2Q8WU79 429 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-201ENST00000340611 ACOT12Q8WYK0 555 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 GCDHQ92947 438 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-201ENST00000340611 RFKQ969G6 155 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
BRAT1-201ENST00000340611 A0A1W2PPK0 400 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ARPC1BO15143 372 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 KHDRBS3O75525 346 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 STX11O75558 287 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 NKX2-2O95096 273 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 NQO2P16083 231 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 RNF4P78317 190 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 PLAURQ03405 335 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 SFXN4Q6P4A7 337 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 C9orf40Q8IXQ3 194 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 OR4C3Q8NH37 302 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 GNPDA2Q8TDQ7 276 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 CPNE2Q96FN4 548 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 UBL7Q96S82 380 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF350Q9GZX5 532 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 HINT3Q9NQE9 182 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 DUSP22Q9NRW4 184 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ZFP57Q9NU63 452 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 AKAP7Q9P0M2 348 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 MMACHCQ9Y4U1 282 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 PRRC2CQ9Y520 2896 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 A0A1B0GWJ7 208 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 SURF4O15260 269 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ADCYAP1P18509 176 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 LAP3P28838 519 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 E2F1Q01094 437 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ISXQ2M1V0 245 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 H3F3CQ6NXT2 135 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 OVCH1Q7RTY7 1134 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 NKAIN4Q8IVV8 208 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 RELTQ969Z4 430 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 H2AFY2Q9P0M6 372 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 CBLCQ9ULV8 474 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 CELA2AP08217 269 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 RBMS1P29558 406 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 AKR1C3P42330 323 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 MTNR1BP49286 362 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 EMP2P54851 167 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 TSPAN31Q12999 210 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 ZNHIT3Q15649 155 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 TMEM255AQ5JRV8 349 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 MRPL2Q5T653 305 aaKnown RBP13.63□□□□□ -0.23
BRAT1-201ENST00000340611 BTN2A1Q7KYR7 527 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 OR52B4Q8NGK2 314 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 NPTNQ9Y639 398 aa13.63□□□□□ -0.23
BRAT1-201ENST00000340611 NPR2P20594 1047 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ECH1Q13011 328 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 IL11RAQ14626 422 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 TRIP6Q15654 476 aaKnown RBP13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ELAVL1Q15717 326 aaKnown RBP13.62□□□□□ -0.23
BRAT1-201ENST00000340611 CSRP2Q16527 193 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 FAAP20Q6NZ36 180 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 PLBD1Q6P4A8 553 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 BCORP1Q8N888 145 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 OR56B4Q8NH76 319 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 COL5A1P20908 1838 aaPredicted RBP13.62□□□□□ -0.23
BRAT1-201ENST00000340611 MED12Q93074 2177 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 SYNDIG1LA6NDD5 238 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 C5orf52A6NGY3 159 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 BRINP1O60477 761 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 IGKV3-11P04433 115 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 COX5BP10606 129 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 EDN3P14138 238 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ANXA7P20073 488 aaKnown RBP13.62□□□□□ -0.23
BRAT1-201ENST00000340611 RPTNQ6XPR3 784 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 TIPARPQ7Z3E1 657 aaKnown RBP13.62□□□□□ -0.23
BRAT1-201ENST00000340611 CEACAM19Q7Z692 300 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ANKRD37Q7Z713 158 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 MRGPREQ86SM8 312 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ZNF619Q8N2I2 560 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 OR13C5Q8NGS8 318 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 KLHDC3Q9BQ90 382 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 ALG8Q9BVK2 526 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 TTTY10Q9BZA0 68 aa13.62□□□□□ -0.23
BRAT1-201ENST00000340611 MTHFD2LQ9H903 347 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms