RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SH3GL3Q99963 347 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SIKE1Q9BRV8 207 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DPH7Q9BTV6 452 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FAIM2Q9BWQ8 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ANKRD19PQ9H560 264 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 UBE2TQ9NPD8 197 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 UBQLN4Q9NRR5 601 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MED17Q9NVC6 651 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DKKL1Q9UK85 242 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ACACAQ13085 2346 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MED12LQ86YW9 2145 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ARID1AO14497 2285 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 A0A087WUV0 522 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 LOC105369274A0A096LPK9 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TRAV10A0A0B4J240 114 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 LOC102723532A0A0G2JNH3 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF503-AS2A6NEH8 195 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR6C6A6NF89 314 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF860A6NHJ4 632 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC30A6NM36 301 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR52A4PA6NMU1 304 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 NPIPA3F8WFD2 350 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PSMD12O00232 456 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TGOLN2O43493 480 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR1F1O43749 312 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PRKNO60260 465 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SMIM24O75264 130 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 NDUFA3O95167 84 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 CST4P01036 141 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 RPS17P08708 135 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MIFP14174 115 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 M6PRP20645 277 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 NMBRP28336 390 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 MIPP30301 263 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 S100A5P33763 92 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PGM1P36871 562 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PAFAH1B1P43034 410 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 RGS4P49798 205 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DNA2P51530 1060 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF75DP51815 510 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 NR0B1P51843 470 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 POLR2HP52434 150 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SELENOVP59797 346 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TUBA4AP68366 448 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC35B1P78383 322 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 BASP1P80723 227 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SPOCK1Q08629 439 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 APOFQ13790 326 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 HNF4GQ14541 408 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FAM189A2Q15884 450 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ESCO2Q56NI9 601 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 XKR6Q5GH73 641 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ANKRD22Q5VYY1 191 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 WDR25Q64LD2 544 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 HBMQ6B0K9 141 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 CDC73Q6P1J9 531 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM270Q6UE05 265 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ANGPTL8Q6UXH0 198 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C16orf62Q7Z3J2 963 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF573Q86YE8 665 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR4N4Q8N0Y3 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SIRT6Q8N6T7 355 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 UBL4BQ8N7F7 174 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 HSD17B11Q8NBQ5 300 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 VPS37AQ8NEZ2 397 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR10S1Q8NGN2 331 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 OR5AR1Q8NGP9 310 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SYNPRQ8TBG9 265 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TSPEARQ8WU66 669 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ACOT11Q8WXI4 607 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 N4BP2L2Q92802 583 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DDIT4LQ96D03 193 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 GRAMD2BQ96HH9 432 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C7orf34Q96L11 122 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 RDH12Q96NR8 316 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZBTB18Q99592 522 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 BAG1Q99933 345 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C20orf144Q9BQM9 153 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 CNPPD1Q9BV87 410 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 GGTLC1Q9BX51 225 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 C1QTNF5Q9BXJ0 243 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PARD6GQ9BYG4 376 aaPredicted RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 BARHL1Q9BZE3 327 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ULBP2Q9BZM5 246 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLA2Q9H6Q3 261 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 BCL2L10Q9HD36 194 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC7A10Q9NS82 523 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 TMEM106BQ9NUM4 274 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 DOK5Q9P104 306 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC17A7Q9P2U7 560 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 PEF1Q9UBV8 284 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SEC14L4Q9UDX3 406 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 LGALS13Q9UHV8 139 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF222Q9UK12 451 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 FBXW2Q9UKT8 454 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF148Q9UQR1 794 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 AP3M1Q9Y2T2 418 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SLC6A5Q9Y345 797 aa1.18□□□□□ -2.22
LINC00643-201ENST00000334389 SF3B6Q9Y3B4 125 aaKnown RBP1.18□□□□□ -2.22
LINC00643-201ENST00000334389 HYOU1Q9Y4L1 999 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms