RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ACKR4Q9NPB9 350 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 PGAM2P15259 253 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 HIST1H1TP22492 207 aaPredicted RBP16.46■□□□□ 0.23
PKP3-201ENST00000331563 ZNF658BQ4V348 819 aaPredicted RBP16.46■□□□□ 0.23
PKP3-201ENST00000331563 VWA2Q5GFL6 755 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 LIPNQ5VXI9 398 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 OR4K14Q8NGD5 310 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 OR5AP2Q8NGF4 316 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 OR5AK2Q8NH90 309 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 DPEP2Q9H4A9 486 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 MMP26Q9NRE1 261 aa16.46■□□□□ 0.23
PKP3-201ENST00000331563 ZNF208O43345 1280 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 CTAG2O75638 210 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 DCNP07585 359 aaKnown RBP16.46■□□□□ 0.22
PKP3-201ENST00000331563 CPT2P23786 658 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 RBM34P42696 430 aaKnown RBP16.46■□□□□ 0.22
PKP3-201ENST00000331563 GAS6Q14393 721 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 LBHQ53QV2 105 aaPredicted RBP16.46■□□□□ 0.22
PKP3-201ENST00000331563 NCMAPQ5T1S8 102 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 TMEM205Q6UW68 189 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 ETV3LQ6ZN32 361 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 Q96M85 177 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 C2orf88Q9BSF0 95 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 ATG5Q9H1Y0 275 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 EPHX3Q9H6B9 360 aa16.46■□□□□ 0.22
PKP3-201ENST00000331563 THAP10Q9P2Z0 257 aaPredicted RBP16.46■□□□□ 0.22
PKP3-201ENST00000331563 CPED1A4D0V7 1026 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 MCIDASD6RGH6 385 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 OR8G3PP0DMU2 310 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 ACY1Q03154 408 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 ANKRD16Q6P6B7 361 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 ZNRF4Q8WWF5 429 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 S100PBPQ96BU1 408 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NMNAT3Q96T66 252 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NRIP2Q9BQI9 281 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 SELENOIQ9C0D9 397 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 C1orf198Q9H425 327 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 PRDM13Q9H4Q3 707 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 ADAM18Q9Y3Q7 739 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
PKP3-201ENST00000331563 BTBD17A6NE02 478 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
PKP3-201ENST00000331563 AGPAT2O15120 278 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 FGF16O43320 207 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 TSPAN7P41732 249 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 CSNK1G2P78368 415 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 PJVKQ0ZLH3 352 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 ELAVL1Q15717 326 aaKnown RBP16.45■□□□□ 0.22
PKP3-201ENST00000331563 TMEM31Q5JXX7 168 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NKAIN2Q5VXU1 208 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 CDPF1Q6NVV7 123 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 SLC48A1Q6P1K1 146 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 KCTD9Q7L273 389 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 FAM220AQ7Z4H9 259 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 BAP18Q8IXM2 172 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NRSN1Q8IZ57 195 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 OR4E2Q8NGC2 313 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NUBPLQ8TB37 319 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 CASTOR1Q8WTX7 329 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 NKX3-1Q99801 234 aaPredicted RBP16.45■□□□□ 0.22
PKP3-201ENST00000331563 AICDAQ9GZX7 198 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 CHRDQ9H2X0 955 aa16.45■□□□□ 0.22
PKP3-201ENST00000331563 TRAV8-7A0A075B6U6 113 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 C13orf42A0A1B0GVH6 325 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 CXorf65A6NEN9 183 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 CLEC3AO75596 197 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 CD1AP06126 327 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 HEXBP07686 556 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 ACTBP60709 375 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 ACTG1P63261 375 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 KRBOX4Q5JUW0 171 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 ARHGAP40Q5TG30 622 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 MFSD12Q6NUT3 480 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 LPCAT3Q6P1A2 487 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 FIGNL1Q6PIW4 674 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 DNM1P46Q6ZS02 220 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 ZNF627Q7L945 461 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 PARGQ86W56 976 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 TGIF2LXQ8IUE1 241 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 CLEC1AQ8NC01 280 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 DCUN1D4Q92564 292 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 EDAQ92838 391 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 SLC25A21Q9BQT8 299 aaPredicted RBP16.44■□□□□ 0.22
PKP3-201ENST00000331563 TGIF2Q9GZN2 237 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 RHOFQ9HBH0 211 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 TMEM27Q9HBJ8 222 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 RCC2Q9P258 522 aaKnown RBP16.44■□□□□ 0.22
PKP3-201ENST00000331563 MDC1Q14676 2089 aaKnown RBP16.44■□□□□ 0.22
PKP3-201ENST00000331563 NUDT19A8MXV4 375 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 PEX12O00623 359 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 SFTA3P0C7M3 94 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 F2RL1P55085 397 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 TAS2R19P59542 299 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 DUSP5Q16690 384 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 ATPAF1Q5TC12 328 aaPredicted RBP16.44■□□□□ 0.22
PKP3-201ENST00000331563 OR2L2Q8NH16 312 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 PIK3IP1Q96FE7 263 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 RPS10P5Q9NQ39 176 aa16.44■□□□□ 0.22
PKP3-201ENST00000331563 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms