RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PINLYPA6NC86 204 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 FAM25AB3EWG3 89 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 FAM25CB3EWG5 89 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 FAM25GB3EWG6 89 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 RAMP1O60894 148 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 NEURL1O76050 574 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 HLA-DQA2P01906 255 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 CNR1P21554 472 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 SRD5A2P31213 254 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 PSMB10P40306 273 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 YIF1BQ5BJH7 314 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 IDNKQ5T6J7 187 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 TMEM225Q6GV28 225 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 PAMR1Q6UXH9 720 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 YRDCQ86U90 279 aaKnown RBP18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 KCTD12Q96CX2 325 aaKnown RBP18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 MRPL48Q96GC5 212 aaKnown RBP18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 KLHL15Q96M94 604 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 SIGLEC12Q96PQ1 595 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 SLA2Q9H6Q3 261 aa18.11■□□□□ 0.49
RIPPLY3-201ENST00000329553 SLC43A1O75387 559 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ZNF17P17021 662 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ALOX5APP20292 161 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 CRABP1P29762 137 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 THBS2P35442 1172 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 BIDP55957 195 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 B3GALT5-AS1P59052 145 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 SLC35A1P78382 337 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 UEVLDQ8IX04 471 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 GHSRQ92847 366 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 PIGQQ9BRB3 760 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 IRF2BPLQ9H1B7 796 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 MRPL22Q9NWU5 206 aaKnown RBP18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 EXTL2Q9UBQ6 330 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 COA3Q9Y2R0 106 aaPredicted RBP18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 MUC6Q6W4X9 2439 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 PMS2P2O95744 297 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 FMODQ06828 376 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ZNF239Q16600 458 aaKnown RBP18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 Q5BKY6 102 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 FAM205BPQ63HN1 556 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 LINC00696Q6ZRV3 163 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 GPAT4Q86UL3 456 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 LRRC28Q86X40 367 aaPredicted RBP18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 CLEC1AQ8NC01 280 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ABHD4Q8TB40 342 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 PLA2G3Q9NZ20 509 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 LAMP5Q9UJQ1 280 aa18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ING1Q9UK53 422 aaPredicted RBP18.1■□□□□ 0.49
RIPPLY3-201ENST00000329553 ZFHX2Q9C0A1 2572 aaPredicted RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 IGKV1D-43A0A0B4J1Z2 117 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 A0A0G2JMP0 313 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 A0A0X1KG70 313 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 ZNF593O00488 134 aaPredicted RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 CEACAM1P13688 526 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 RAC1P63000 192 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 FOXO1Q12778 655 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 CDK5R1Q15078 307 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 TRAM1Q15629 374 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 RPL22L1Q6P5R6 122 aaKnown RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 YIPF7Q8N8F6 280 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 OR4M2Q8NGB6 313 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 RNF166Q96A37 237 aaPredicted RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 OXGR1Q96P68 337 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 SLX1AQ9BQ83 275 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 UTP23Q9BRU9 249 aaKnown RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 MRM2Q9UI43 246 aaKnown RBP18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 KCNG2Q9UJ96 466 aa18.09■□□□□ 0.49
RIPPLY3-201ENST00000329553 AQP7P3A6NL99 342 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 SC5DO75845 299 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 WDPCPO95876 746 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 OR8G3PP0DMU2 310 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 NOVA1P51513 510 aaKnown RBP18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 BLVRAP53004 296 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 OR14L1PQ8NHC6 308 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 THEM6Q8WUY1 208 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 SMIM19Q96E16 107 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 MNTQ99583 582 aa18.08■□□□□ 0.49
RIPPLY3-201ENST00000329553 TRAF3IP2O43734 574 aaPredicted RBP18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 ORC5O43913 435 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 MPZL1O95297 269 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 EDNRAP25101 427 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 ERP29P30040 261 aaKnown RBP18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 CASRP41180 1078 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 INPP1P49441 399 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 H3F3AP84243 136 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 KCTD20Q7Z5Y7 419 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 VASH2Q86V25 355 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 TPRA1Q86W33 373 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 OTOSQ8NHW6 89 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 AMELYQ99218 206 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 ZFP64Q9NPA5 681 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 ABI3Q9P2A4 366 aa18.08■□□□□ 0.48
RIPPLY3-201ENST00000329553 A0A0J9YW62 118 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 TRBV2A0A0J9YWF9 115 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 GDI2P50395 445 aaKnown RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 GLO1Q04760 184 aa18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 SRSF6Q13247 344 aaKnown RBP18.07■□□□□ 0.48
RIPPLY3-201ENST00000329553 MEP1BQ16820 701 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms