RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 ARRB2P32121 409 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CCKARP32238 428 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TGFBR1P36897 503 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TSFMP43897 325 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 DVL1P1P54792 670 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RPS18P62269 152 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 SLC7A9P82251 487 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ANKRD16Q6P6B7 361 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 OR52I2Q8NH67 350 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 SPTSSAQ969W0 71 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 LAMB1P07942 1786 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 MEIKINA0A087WXM9 373 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 A0A1W2PPH5 198 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 GFRA2O00451 464 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 GJB5O95377 273 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CD79AP11912 226 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RPS15AP62244 130 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RING1Q06587 406 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 FAM109BQ6ICB4 259 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 FJX1Q86VR8 437 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 NUDCD2Q8WVJ2 157 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 MSI2Q96DH6 328 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TINAGL1Q9GZM7 467 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CRYBG1Q9Y4K1 1723 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TRAV27A0A087WT01 109 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF354AO60765 605 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CEBPBP17676 345 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 USF1P22415 310 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 PRPH2P23942 346 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 APLNRP35414 380 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HAAOP46952 286 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HSF1Q00613 529 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CNN3Q15417 329 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CST6Q15828 149 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 BTNL8Q6UX41 500 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RNF113BQ8IZP6 322 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 LINC00518Q8N0U6 118 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 DYRK2Q92630 601 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CDCA3Q99618 268 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 PLEKHA2Q9HB19 425 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CCDC187A0A096LP49 1063 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 PCBP4P57723 403 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HLXQ14774 488 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HYAL4Q2M3T9 481 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 SOWAHCQ53LP3 525 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RNLSQ5VYX0 342 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF534Q76KX8 674 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 OSTM1Q86WC4 334 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 RIMKLAQ8IXN7 391 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 FAM160A2Q8N612 972 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TOE1Q96GM8 510 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 KIRREL1Q96J84 757 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TAAR9Q96RI9 348 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ATF6BQ99941 703 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 C1orf198Q9H425 327 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HRASLSQ9HDD0 168 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ASIC5Q9NY37 505 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TRPM7Q96QT4 1865 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CDC14CA4D256 554 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 OTUD1Q5VV17 481 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 OR5M10Q6IEU7 315 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF383Q8NA42 475 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 OR9A2Q8NGT5 310 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 MS4A10Q96PG2 267 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 LYSMD1Q96S90 227 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ATOH8Q96SQ7 321 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 CLSTN3Q9BQT9 956 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 A0A0D9SEW6 157 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 XRCC3O43542 346 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 NUDT21O43809 227 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 HNRNPA2B1P22626 353 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 GABRR1P24046 479 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 IL3RAP26951 378 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 KRTDAPP60985 99 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TRA2BP62995 288 aaKnown RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 DSC1Q08554 894 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ETFDHQ16134 617 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 MBOAT2Q6ZWT7 520 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 F2RL3Q96RI0 385 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 MVB12BQ9H7P6 319 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 SPHK2Q9NRA0 654 aa4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF443Q9Y2A4 671 aaPredicted RBP4.96□□□□□ -1.62
SDR42E1-201ENST00000328945 STRCP1A6NGW2 1772 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 FAM166BA8MTA8 275 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF727A8MUV8 499 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 FRS3O43559 492 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 GYPBP06028 91 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 CTSLP07711 333 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 EPXP11678 715 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 ACHEP22303 614 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 DAP3P51398 398 aaKnown RBP4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 ZNF133P52736 654 aaPredicted RBP4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 SHISA6Q6ZSJ9 500 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 LRRTM1Q86UE6 522 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 TMEM217Q8N7C4 229 aa4.95□□□□□ -1.62
SDR42E1-201ENST00000328945 SDR9C7Q8NEX9 313 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms