RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 BOLLQ8N9W6 283 aaKnown RBP10.18□□□□□ -0.78
GINS3-202ENST00000328514 RCBTB1Q8NDN9 531 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 SMARCD2Q92925 531 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 TCEAL3Q969E4 200 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
GINS3-202ENST00000328514 SEC22AQ96IW7 307 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 ZNF587Q96SQ5 575 aaPredicted RBP10.18□□□□□ -0.78
GINS3-202ENST00000328514 SLC6A7Q99884 636 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 TCEAL7Q9BRU2 100 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 NMES1Q9C002 83 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 MBNL1Q9NR56 388 aaKnown RBP10.18□□□□□ -0.78
GINS3-202ENST00000328514 PHPT1Q9NRX4 125 aaPredicted RBP10.18□□□□□ -0.78
GINS3-202ENST00000328514 TMEM74BQ9NUR3 256 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 LPAR3Q9UBY5 353 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 MSRAQ9UJ68 235 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 EDARQ9UNE0 448 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 OR1A2Q9Y585 309 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 NOTCH4Q99466 2003 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 TRPM6Q9BX84 2022 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 SCN3AQ9NY46 2000 aa10.18□□□□□ -0.78
GINS3-202ENST00000328514 IGKV1D-42A0A075B6H8 117 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 A0A1B0GTH9 108 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 FAM171A2A8MVW0 826 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 FOXS1O43638 330 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 EIF1BO60739 113 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 DUS4LO95620 317 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 CEACAM5P06731 702 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 CT62P0C5K7 136 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 LYL1P12980 280 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 IGFBP3P17936 291 aaPredicted RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 PBX2P40425 430 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PMELP40967 661 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 EIF1P41567 113 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 CX3CR1P49238 355 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 CAV2P51636 162 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 PPP1R1AQ13522 171 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 NKPD1Q17RQ9 610 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 LRRC37A5PQ49AS3 106 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 WDR38Q5JTN6 314 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 NUP54Q7Z3B4 507 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 FLVCR1-AS1Q8TAF5 88 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PAQR8Q8TEZ7 354 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 RSC1A1Q92681 617 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 MRGPRFQ96AM1 343 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SLC22A18Q96BI1 424 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 C3orf49Q96BT1 292 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SMIM8Q96KF7 97 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SLC17A9Q9BYT1 436 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 CST11Q9H112 138 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 TINAGQ9UJW2 476 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PILRAQ9UKJ1 303 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 IKZF2Q9UKS7 526 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 COLEC10Q9Y6Z7 277 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SPACA6W5XKT8 324 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 OR2W5A6NFC9 320 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 TVP23AA6NH52 213 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 CCSO14618 274 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SGCEO43556 437 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 LATO43561 262 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 IGKV1D-16P01601 117 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 S100A9P06702 114 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 PGAM2P15259 253 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PTAFRP25105 342 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 HTR2CP28335 458 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 ID2Q02363 134 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 ATXN7L3Q14CW9 347 aaPredicted RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 ZNF74Q16587 644 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 EEF1A1P5Q5VTE0 462 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PAPD4Q6PIY7 484 aaKnown RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 UNQ6126/PRO20091Q6UXV3 157 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 ADGRE4PQ86SQ3 457 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 ZNF614Q8N883 585 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 KDF1Q8NAX2 398 aaPredicted RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 NANPQ8TBE9 248 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 C2CD4CQ8TF44 421 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 AQP3Q92482 292 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 VWCEQ96DN2 955 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 LRRC3BQ96PB8 259 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 TSSK2Q96PF2 358 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 OR51M1Q9H341 326 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 SEC61A2Q9H9S3 476 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 PRMT8Q9NR22 394 aaPredicted RBP10.17□□□□□ -0.78
GINS3-202ENST00000328514 SMCO4Q9NRQ5 59 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 ASH2LQ9UBL3 628 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 KLK13Q9UKR3 277 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 POMT1Q9Y6A1 747 aa10.17□□□□□ -0.78
GINS3-202ENST00000328514 DCTN6O00399 190 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 SCAMP1O15126 338 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 NARSO43776 548 aaKnown RBP10.16□□□□□ -0.78
GINS3-202ENST00000328514 CD5P06127 495 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 GLAP06280 429 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 ASAH2BP0C7U1 165 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 SLC35E2P0CK97 266 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 RAB6AP20340 208 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 S1PR1P21453 382 aa10.16□□□□□ -0.78
GINS3-202ENST00000328514 S100PP25815 95 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms