RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 PCNX1Q96RV3 2341 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 A0A087WXM4 84 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 A0A0G2JNJ9 132 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 ATXN7O15265 892 aaPredicted RBP13.44□□□□□ -0.26
PRPF3-201ENST00000324862 INMTO95050 263 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 CLPTM1O96005 669 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 IL2RAP01589 272 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 IGHA1P01876 353 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 DCKP27707 260 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 IRF3Q14653 427 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 ST6GALNAC3Q8NDV1 305 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 POLE4Q9NR33 117 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 Q9UFV3 132 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 SCOCQ9UIL1 159 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 SNX5Q9Y5X3 404 aa13.44□□□□□ -0.26
PRPF3-201ENST00000324862 INTS1Q8N201 2190 aaKnown RBP13.44□□□□□ -0.26
PRPF3-201ENST00000324862 LRRTM2O43300 516 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 OR3A2P47893 321 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF133P52736 654 aaPredicted RBP13.43□□□□□ -0.26
PRPF3-201ENST00000324862 RBPJQ06330 500 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 SLC16A9Q7RTY1 509 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ACBD7Q8N6N7 88 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 FGFBP3Q8TAT2 258 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 GATAD2BQ8WXI9 593 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF416Q9BWM5 594 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 CCNB1IP1Q9NPC3 277 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 DAPL1A0PJW8 107 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 CENPBD1B2RD01 187 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 BMP5P22003 454 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 PTGER4P35408 488 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 UQCRFS1P47985 274 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ARF1P84077 181 aaKnown RBP13.43□□□□□ -0.26
PRPF3-201ENST00000324862 EIF2S3LQ2VIR3 472 aaKnown RBP13.43□□□□□ -0.26
PRPF3-201ENST00000324862 FBXW9Q5XUX1 488 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 OR2A2Q6IF42 318 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 KLHL24Q6TFL4 600 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ATCAYQ86WG3 371 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 CDC20BQ86Y33 519 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF610Q8N9Z0 462 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 POMGNT2Q8NAT1 580 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 FOXB1Q99853 325 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 ALG8Q9BVK2 526 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 CDCA4Q9BXL8 241 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 MARCH7Q9H992 704 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 GP6Q9HCN6 339 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 GLRX2Q9NS18 164 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 LHFPL6Q9Y693 200 aa13.43□□□□□ -0.26
PRPF3-201ENST00000324862 TRIM64CA6NLI5 447 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 IL18BPO95998 194 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LALBAP00709 142 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 CGAP01215 116 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ITGA5P08648 1049 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 CEACAM8P31997 349 aaPredicted RBP13.42□□□□□ -0.26
PRPF3-201ENST00000324862 TIMP3P35625 211 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ENTPD1P49961 510 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 OR12D2P58182 307 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 TMED1Q13445 227 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 MED22Q15528 200 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LUZP2Q86TE4 346 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LIX1LQ8IVB5 337 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 MRPS26Q9BYN8 205 aaKnown RBP13.42□□□□□ -0.26
PRPF3-201ENST00000324862 TMEM38BQ9NVV0 291 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 MALT1Q9UDY8 824 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 PNMA8CA0A1B0GUJ8 204 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF503-AS2A6NEH8 195 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF587BE7ETH6 402 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 RER1O15258 196 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LYZL6O75951 148 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 HSMCR30P0CW71 290 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ZNF823P16415 610 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 MYL12AP19105 171 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 RIPPLY2Q5TAB7 128 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 CFAP77Q6ZQR2 320 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 DCXRQ7Z4W1 244 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ZFP41Q8N8Y5 198 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 OTOSQ8NHW6 89 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 FNDC8Q8TC99 324 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 FBXO17Q96EF6 278 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 MAP6Q96JE9 813 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LINC00470Q9BZP3 86 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
PRPF3-201ENST00000324862 ALOX5APP20292 161 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 GTF2A1P52655 376 aaPredicted RBP13.41□□□□□ -0.26
PRPF3-201ENST00000324862 TUBA1BP68363 451 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 TUBA4AP68366 448 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 TLE1Q04724 770 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 POU4F2Q12837 409 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 ENDOGQ14249 297 aaKnown RBP13.41□□□□□ -0.26
PRPF3-201ENST00000324862 SF3B4Q15427 424 aaKnown RBP eCLIP13.41□□□□□ -0.266e-8■■■■□ 21.7
PRPF3-201ENST00000324862 LRRN1Q6UXK5 716 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 TUBA1AQ71U36 451 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 NANOGP1Q8N7R0 232 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 OR6K3Q8NGY3 331 aa13.41□□□□□ -0.26
PRPF3-201ENST00000324862 SPRYD4Q8WW59 207 aaPredicted RBP13.41□□□□□ -0.26
PRPF3-201ENST00000324862 CDADC1Q9BWV3 514 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms