RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 KIR3DX1Q9H7L2 352 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DZANK1Q9NVP4 752 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PRRC2BQ5JSZ5 2229 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TRAV20A0A0B4J274 112 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ACTL6AO96019 429 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PTGER1P34995 402 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 IGFALSP35858 605 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 MAGEB1P43366 347 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SLC17A1Q14916 467 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RHEBQ15382 184 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 GFOD2Q3B7J2 385 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FHL5Q5TD97 284 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FIGNL1Q6PIW4 674 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 MDGA2Q7Z553 956 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 BMPERQ8N8U9 685 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ADAMTS17Q8TE56 1095 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CASTOR1Q8WTX7 329 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 MYLIPQ8WY64 445 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 INTS12Q96CB8 462 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 KIRREL1Q96J84 757 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 Q96M85 177 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TINAGL1Q9GZM7 467 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TINAGQ9UJW2 476 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TRAV8-7A0A075B6U6 113 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 AP4M1O00189 453 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 LDB3O75112 727 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PLGP00747 810 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CISD3P0C7P0 127 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ATP1B3P54709 279 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CTXN1P60606 82 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HTRA3P83110 453 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FABP9Q0Z7S8 132 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 BIKQ13323 160 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TOMM34Q15785 309 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM215Q68D42 235 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OR10K2Q6IF99 312 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RFLNBQ8N5W9 214 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 TERB2Q8NHR7 220 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OTOSQ8NHW6 89 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 C14orf79Q96F83 325 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OCSTAMPQ9BR26 566 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FAM212BQ9NTI7 297 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FRRS1LQ9P0K9 344 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DOCK4Q8N1I0 1966 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SERINC4A6NH21 518 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 K7ESM1 405 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 BPNT1O95861 308 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CD5P06127 495 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 HNRNPA1P09651 372 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF735P0CB33 412 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ADH5P11766 374 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PGAM2P15259 253 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 AQP2P41181 271 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 ACAA2P42765 397 aaKnown RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CLDN2P57739 230 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SGCGQ13326 291 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 FHL1Q13642 323 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 GPR18Q14330 331 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 SGCAQ16586 387 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 OPN5Q6U736 354 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 NAA40Q86UY6 237 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DVL3Q92997 716 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 RERGQ96A58 199 aaPredicted RBP4.33□□□□□ -1.72
PTPN13-201ENST00000316707 CHST6Q9GZX3 395 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 LUZP4Q9P127 313 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PRODH2Q9UF12 536 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 DTX4Q9Y2E6 619 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 PLXNA3P51805 1871 aa4.33□□□□□ -1.72
PTPN13-201ENST00000316707 BRCA1P38398 1863 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C9orf170A2RU37 121 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 M0QYG6 137 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HPGDP15428 266 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RAB5AP20339 215 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 AKR1C2P52895 323 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 AKR1C1Q04828 323 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF77Q15935 545 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 KIRREL2Q6UWL6 708 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 KCTD9Q7L273 389 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 DPY19L4Q7Z388 723 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 JAGN1Q8N5M9 183 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR13C8Q8NGS7 320 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FGF13Q92913 245 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 HIST1H2BAQ96A08 127 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 CTHRC1Q96CG8 243 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SULT4A1Q9BR01 284 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RGCCQ9H4X1 137 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 PLEKHA2Q9HB19 425 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ACKR4Q9NPB9 350 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 MGAMO43451 1857 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 C13orf42A0A1B0GVH6 325 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 OR10H2O60403 315 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 GSTP1P09211 210 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SFTA3P0C7M3 94 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 FAM157CP0CG43 387 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 ADCYAP1P18509 176 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SULT1A2P50226 295 aa4.32□□□□□ -1.72
PTPN13-201ENST00000316707 RIDAP52758 137 aaKnown RBP4.32□□□□□ -1.72
PTPN13-201ENST00000316707 SUCLG1P53597 346 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms