RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PPT1P50897 306 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 DOC2BQ14184 412 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 VWA2Q5GFL6 755 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 KIRREL2Q6UWL6 708 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 TSLPQ969D9 159 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 ATF6BQ99941 703 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 IL20Q9NYY1 176 aa12.58□□□□□ -0.4
SPAST-201ENST00000315285 ZNF728P0DKX0 622 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 CAPZBP47756 277 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 TIAL1Q01085 375 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPAST-201ENST00000315285 RAB31Q13636 194 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 IAH1Q2TAA2 248 aaPredicted RBP12.57□□□□□ -0.4
SPAST-201ENST00000315285 LILRA6Q6PI73 481 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 SIRT6Q8N6T7 355 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 GPR32P1Q8NGA4 272 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 EDAQ92838 391 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ARFGEF1Q9Y6D6 1849 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 H0YIG0 161 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 PRSS23O95084 383 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ENPP1P22413 925 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ZNF136P52737 540 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 CARD18P57730 90 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 IKZF1Q13422 519 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ZNF793Q6ZN11 406 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 TMEM68Q96MH6 324 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 OR11A1Q9GZK7 315 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.57□□□□□ -0.41e-6■■■■■ 27.9
SPAST-201ENST00000315285 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ICMTO60725 284 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ICOSLGO75144 302 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 NME2P22392 152 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 GZMKP49863 264 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 DCAF12Q5T6F0 453 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 SECTM1Q8WVN6 248 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 HRASLSQ9HDD0 168 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 NEU3Q9UQ49 428 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 NOSIPQ9Y314 301 aaKnown RBP12.57□□□□□ -0.4
SPAST-201ENST00000315285 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 COL5A3P25940 1745 aaPredicted RBP12.57□□□□□ -0.4
SPAST-201ENST00000315285 ACTL6BO94805 426 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 IGHEP01854 428 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 IL2RGP31785 369 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 WDR34Q96EX3 536 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 MRGPRX3Q96LB0 322 aa12.57□□□□□ -0.4
SPAST-201ENST00000315285 ASCC3Q8N3C0 2202 aaKnown RBP12.56□□□□□ -0.4
SPAST-201ENST00000315285 MSTNO14793 375 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 M6PRP20645 277 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 TGM1P22735 817 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 CCR5P51681 352 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 NKX6-1P78426 367 aaPredicted RBP12.56□□□□□ -0.4
SPAST-201ENST00000315285 EGR3Q06889 387 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 SELENBP1Q13228 472 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 OR4Q3Q8NH05 313 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 SGK3Q96BR1 496 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 BANF2Q9H503 90 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 CCSO14618 274 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 PRAMEF4O60810 478 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 OMGP23515 440 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 KIR2DL3P43628 341 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 HMGA2P52926 109 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 STAC2Q6ZMT1 411 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 ZNF813Q6ZN06 617 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 GLCCI1Q86VQ1 547 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 FAM71CQ8NEG0 241 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 HLA-CQ95604 372 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 OBP2BQ9NPH6 170 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 IDSB3KWA1 339 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 TMEM215Q68D42 235 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 C8orf82Q6P1X6 216 aaPredicted RBP12.56□□□□□ -0.4
SPAST-201ENST00000315285 KANSL1Q7Z3B3 1105 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 RNF170Q96K19 258 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 ABHD16AO95870 558 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 MT-CO2P00403 227 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 RAD52P43351 418 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 CDK5Q00535 292 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 FAM53BQ14153 422 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 FAAP20Q6NZ36 180 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 PIGLQ9Y2B2 252 aa12.56□□□□□ -0.4
SPAST-201ENST00000315285 MN1Q10571 1320 aaPredicted RBP12.55□□□□□ -0.4
SPAST-201ENST00000315285 TMEM235A6NFC5 223 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 ZNF780AO75290 641 aaPredicted RBP12.55□□□□□ -0.4
SPAST-201ENST00000315285 EPXP11678 715 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 PCMT1P22061 227 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 SLC25A35Q3KQZ1 300 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 RHOUQ7L0Q8 258 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 DOK3Q7L591 496 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 OR1M1Q8NGA1 313 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 FGF14Q92915 247 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms