RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OR51J1Q9H342 316 aa11.15□□□□□ -0.62
RNF4-201ENST00000314289 TXNIPQ9H3M7 391 aa11.15□□□□□ -0.62
RNF4-201ENST00000314289 RANBP3Q9H6Z4 567 aaPredicted RBP11.15□□□□□ -0.62
RNF4-201ENST00000314289 SLC22A23A1A5C7 686 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 ZNF879B4DU55 563 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 TSPAN4O14817 238 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 UCHL1P09936 223 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 GIFP27352 417 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 EIF1AXP47813 144 aaKnown RBP11.15□□□□□ -0.63
RNF4-201ENST00000314289 ZNF41P51814 821 aaPredicted RBP11.15□□□□□ -0.63
RNF4-201ENST00000314289 PCOLCEQ15113 449 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 EMC4Q5J8M3 183 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 ZNF676Q8N7Q3 588 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 GALNT11Q8NCW6 608 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 ZNF519Q8TB69 540 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 OIT3Q8WWZ8 545 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 KLHL15Q96M94 604 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 IER2Q9BTL4 223 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 TRAF4Q9BUZ4 470 aaPredicted RBP11.15□□□□□ -0.63
RNF4-201ENST00000314289 CLEC4MQ9H2X3 399 aaPredicted RBP11.15□□□□□ -0.63
RNF4-201ENST00000314289 ELOVL3Q9HB03 270 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 SLC39A1Q9NY26 324 aa11.15□□□□□ -0.63
RNF4-201ENST00000314289 H0YC42 278 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 NTN3O00634 580 aaPredicted RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 EIF1AYO14602 144 aaKnown RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 KLF7O75840 302 aaPredicted RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 ABHD16AO95870 558 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 F10P00742 488 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 SERPINA3P01011 423 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 TPOP07202 933 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 FBXO45P0C2W1 286 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 PTHLHP12272 177 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 BTCP35070 178 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 CCR6P51684 374 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 BTG1P62324 171 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 TMEM65Q6PI78 240 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 TPRA1Q86W33 373 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 PRSS35Q8N3Z0 413 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 CYSLTR2Q9NS75 346 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 NKIRAS2Q9NYR9 191 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 PNPP00491 289 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 CD53P19397 219 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 MYBPHQ13203 477 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 RIN1Q13671 783 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 ALKBH1Q13686 389 aaKnown RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 IL11RAQ14626 422 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 FAM198BQ6UWH4 519 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 CHMP1BQ7LBR1 199 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 LRRC28Q86X40 367 aaPredicted RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 GNRHR2Q96P88 292 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 DPAGT1Q9H3H5 408 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 ZNF160Q9HCG1 818 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 C19orf25Q9UFG5 118 aaPredicted RBP11.14□□□□□ -0.63
RNF4-201ENST00000314289 WIF1Q9Y5W5 379 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 HS3ST3B1Q9Y662 390 aa11.14□□□□□ -0.63
RNF4-201ENST00000314289 TRABD2BA6NFA1 517 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 NPIPA5E9PKD4 350 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 SSNA1O43805 119 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 OR2T1O43869 369 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 RAMP1O60894 148 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 HRGP04196 525 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 TACSTD2P09758 323 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 GAAP10253 952 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 PTBP1P26599 531 aaKnown RBP eCLIP11.13□□□□□ -0.63
RNF4-201ENST00000314289 PITPNBP48739 271 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 CARD17Q5XLA6 110 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 OR2G2Q8NGZ5 317 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 OTOSQ8NHW6 89 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 POC1BQ8TC44 478 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 ACOT12Q8WYK0 555 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 SPACA9Q96E40 222 aaPredicted RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 OR5B2Q96R09 309 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 C1QTNF6Q9BXI9 259 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 GHITMQ9H3K2 345 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 HEXA-AS1Q9H8Q6 139 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 C12orf4Q9NQ89 552 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 MRPL15Q9P015 296 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 FBXL3Q9UKT7 428 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 NPIPA1Q9UND3 350 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 CNOT1A5YKK6 2376 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 TRAV8-7A0A075B6U6 113 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 IGLV1-36A0A0B4J1U3 117 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 TCRBP04435 133 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 CFL1P23528 166 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 DNASE1P24855 282 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 ZFP36L1Q07352 338 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 SLC23A3Q6PIS1 610 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 WDSUB1Q8N9V3 476 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 SCMH1Q96GD3 660 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 EMC7Q9NPA0 242 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 PPIEQ9UNP9 301 aaKnown RBP11.13□□□□□ -0.63
RNF4-201ENST00000314289 LAMA5O15230 3695 aa11.13□□□□□ -0.63
RNF4-201ENST00000314289 MPC2O95563 127 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms