RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 M0QYG6 137 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 SOX1O00570 391 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF432O94892 652 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 LDOC1O95751 146 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 FOLR1P15328 257 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 GALNSP34059 522 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 SLC6A8P48029 635 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 SPOCK1Q08629 439 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 RBMS2Q15434 407 aaKnown RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 B3GNTL1Q67FW5 361 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 ALKAL2Q6UX46 152 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 OR1J4Q8NGS1 313 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 DUSP15Q9H1R2 295 aaPredicted RBP22.79■■□□□ 1.24
HOXB3-201ENST00000311626 RDH8Q9NYR8 311 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 DHDHQ9UQ10 334 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 CABIN1Q9Y6J0 2220 aa22.79■■□□□ 1.24
HOXB3-201ENST00000311626 A0A1B0GTQ1 180 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 LILRA5A6NI73 299 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 CPN1P15169 458 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 CFHR1Q03591 330 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 SMUG1Q53HV7 270 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 GLYATL3Q5SZD4 288 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 SLC18B1Q6NT16 456 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 C3P1Q6ZMU1 363 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 ZNF519Q8TB69 540 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 LRP12Q9Y561 859 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 IGLV1-36A0A0B4J1U3 117 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 PRSS3P35030 304 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 C1orf140Q5VVS0 124 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 DNM1P46Q6ZS02 220 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 STK35Q8TDR2 534 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 C8orf44Q96CB5 159 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 RADILQ96JH8 1075 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.78■■□□□ 1.24
HOXB3-201ENST00000311626 EMC9Q9Y3B6 208 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 H3BMH7 237 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 IL5P05113 134 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 PGCP20142 388 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 MNDAP41218 407 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 ELAVL1Q15717 326 aaKnown RBP22.78■■□□□ 1.24
HOXB3-201ENST00000311626 RAB30Q15771 203 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 TMEM225Q6GV28 225 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 CORO6Q6QEF8 472 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 COQ8AQ8NI60 647 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 RNF128Q8TEB7 428 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 ASB5Q8WWX0 329 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 CXorf58Q96LI9 332 aa22.78■■□□□ 1.24
HOXB3-201ENST00000311626 MRPS18BQ9Y676 258 aaKnown RBP22.78■■□□□ 1.24
HOXB3-201ENST00000311626 SLC22A23A1A5C7 686 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 EIF1AYO14602 144 aaKnown RBP22.77■■□□□ 1.24
HOXB3-201ENST00000311626 OR2A4O95047 310 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 RAP2BP61225 183 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 SGCBQ16585 318 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 C4orf46Q504U0 113 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 LRFN4Q6PJG9 635 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 NKD1Q969G9 470 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 OR2A7Q96R45 310 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 DPYSL5Q9BPU6 564 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 EXO5Q9H790 373 aa22.77■■□□□ 1.24
HOXB3-201ENST00000311626 SHISA8B8ZZ34 492 aa22.77■■□□□ 1.23
HOXB3-201ENST00000311626 ALG1L2C9J202 215 aa22.77■■□□□ 1.23
HOXB3-201ENST00000311626 CSN2P05814 226 aa22.77■■□□□ 1.23
HOXB3-201ENST00000311626 UTP23Q9BRU9 249 aaKnown RBP22.77■■□□□ 1.23
HOXB3-201ENST00000311626 MMACHCQ9Y4U1 282 aa22.77■■□□□ 1.23
HOXB3-201ENST00000311626 LOC100289279A0A1B0GTE1 492 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 A0A1W2PR77 199 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 SNRPGP15A8MWD9 76 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 SLC17A2O00624 439 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 RRASP10301 218 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 FAUP35544 74 aaKnown RBP22.76■■□□□ 1.23
HOXB3-201ENST00000311626 MOGAT2Q3SYC2 334 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 TMEM65Q6PI78 240 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 TMED4Q7Z7H5 227 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 ZDHHC12Q96GR4 267 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 DHRS9Q9BPW9 319 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 VN1R1Q9GZP7 353 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 CTSFQ9UBX1 484 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 ATXN7L1Q9ULK2 861 aaPredicted RBP22.76■■□□□ 1.23
HOXB3-201ENST00000311626 SPEF1Q9Y4P9 236 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 TCRBV16S1A1N1A0A5B0 115 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 UBE2QL1A1L167 161 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 CSF1P09603 554 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 LIPCP11150 499 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 FBLP22087 321 aaKnown RBP22.76■■□□□ 1.23
HOXB3-201ENST00000311626 TNFAIP8L1Q8WVP5 186 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 SLC25A44Q96H78 314 aaPredicted RBP22.76■■□□□ 1.23
HOXB3-201ENST00000311626 CMKLR1Q99788 373 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 TXNIPQ9H3M7 391 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 OPN4Q9UHM6 478 aa22.76■■□□□ 1.23
HOXB3-201ENST00000311626 IGKV1D-43A0A0B4J1Z2 117 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 PLPP3O14495 311 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 AKAIN1P0CW23 69 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 HLXQ14774 488 aaPredicted RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 SMAD2Q15796 467 aaKnown RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 C11orf88Q6PI97 169 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 JAGN1Q8N5M9 183 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 ARL5BQ96KC2 179 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 TINAGL1Q9GZM7 467 aaPredicted RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 ZNF304Q9HCX3 659 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 NUP210LQ5VU65 1888 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms