RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KCMF1Q9P0J7 381 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 C5AR2Q9P296 337 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 EIF3KQ9UBQ5 218 aaKnown RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 KCNN3Q9UGI6 736 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF223Q9UK11 482 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NUP50Q9UKX7 468 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CAMK2AQ9UQM7 478 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 OSGIN2Q9Y236 505 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF443Q9Y2A4 671 aaPredicted RBP4.4□□□□□ -1.71
CKS1B-201ENST00000308987 SLC35A3Q9Y2D2 325 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HSPB11Q9Y547 144 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 HEBP2Q9Y5Z4 205 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 NPTNQ9Y639 398 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CACNG2Q9Y698 323 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 CLCA3PQ9Y6N3 262 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF780BQ9Y6R6 833 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 JMJD1CQ15652 2540 aa4.4□□□□□ -1.71
CKS1B-201ENST00000308987 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 A0A087WV62 115 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 MEIKINA0A087WXM9 373 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0A6YYJ9 748 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 IGKV1-8A0A0C4DH67 115 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0G2JK05 382 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LOC102723532A0A0G2JNH3 316 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 A0A0X1KG70 313 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 A0A1W2PQ72 361 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 DAPL1A0PJW8 107 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FEZF1A0PJY2 475 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CPSF4LA6NMK7 179 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LEUTXA8MZ59 168 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LRRN3E7EW58 273 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PRR23D1E9PI22 279 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 BHLHE40O14503 412 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PGRMC2O15173 223 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OGG1O15527 345 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FABP7O15540 132 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ERI3O43414 337 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ERAL1O75616 437 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 AIFM1O95831 613 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ECDO95905 644 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TCRBP04435 133 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 KLK3P07288 261 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SBK2P0C263 348 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PRR23D2P0DMB1 279 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SULT1A3P0DMM9 295 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SULT1A4P0DMN0 295 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RAB3BP20337 219 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 NDUFS1P28331 727 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CMPK1P30085 196 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PEBP1P30086 187 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 BTCP35070 178 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CD79BP40259 229 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 MNDAP41218 407 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RBM34P42696 430 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TDGF1P3P51864 188 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 AGFG1P52594 562 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF136P52737 540 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PRKAG1P54619 331 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PER3P56645 1201 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RIPPLY3P57055 190 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 AP3S2P59780 193 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RPS7P62081 194 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RPS15AP62244 130 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 EEF1A1P68104 462 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 DHODHQ02127 395 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF791Q3KP31 576 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SLC36A2Q495M3 483 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 KLHL12Q53G59 568 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CLLU1Q5K131 121 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ELFN2Q5R3F8 820 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 IDNKQ5T6J7 187 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF324BQ6AW86 544 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 DMKNQ6E0U4 476 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 MFSD12Q6NUT3 480 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SLC30A6Q6NXT4 461 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SFXN4Q6P4A7 337 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF613Q6PF04 617 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 IGFL2Q6UWQ7 119 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 UNQ9370/PRO34162Q6UXP9 181 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 COX15Q7KZN9 410 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SZRD1Q7Z422 152 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 AMIGO1Q86WK6 493 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OOSP2Q86WS3 158 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 VRK2Q86Y07 508 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 KLBQ86Z14 1044 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 NKAIN4Q8IVV8 208 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 NRMQ8IXM6 262 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ELMOD2Q8IZ81 293 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR2L13Q8N349 312 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LRRC25Q8N386 305 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SIRT6Q8N6T7 355 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SAMD12Q8N8I0 201 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LMNTD1Q8N9Z9 388 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 LINC01555Q8NAE3 123 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 POMGNT2Q8NAT1 580 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FAM98AQ8NCA5 519 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FAM71CQ8NEG0 241 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms