RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 TOMM34Q15785 309 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF74Q16587 644 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 Q499Y3 187 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 WBP2NLQ6ICG8 309 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 GSG1LQ6UXU4 331 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 SHISA6Q6ZSJ9 500 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 TNFAIP8L1Q8WVP5 186 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
CTDP1-202ENST00000299543 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 KCNG2Q9UJ96 466 aa12.18□□□□□ -0.46
CTDP1-202ENST00000299543 CFAP54Q96N23 3096 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 SPTY2D1-AS1A0A0U1RR47 76 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 GABARAPH6UMI1 98 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 ARPC3O15145 178 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 FARS2O95363 451 aaKnown RBP12.17□□□□□ -0.46
CTDP1-202ENST00000299543 UTS2O95399 124 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 IGHV4-34P06331 123 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 CXCR1P25024 350 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 NFYBP25208 207 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 DYRK1AQ13627 763 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 CBFBQ13951 182 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 GK2Q14410 553 aaPredicted RBP12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TMEM184AQ6ZMB5 413 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF595Q8IYB9 648 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 STK35Q8TDR2 534 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 PMM1Q92871 262 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TRAV18A0A075B6X5 111 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 XKRYO14609 159 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF264O43296 627 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 SPARCP09486 303 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 PTH2RP49190 550 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TAS2R20P59543 309 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 BLOC1S1P78537 153 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 ZP2Q05996 745 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 AMELYQ99218 206 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TMEM185BQ9H7F4 350 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 ZMAT3Q9HA38 289 aaKnown RBP12.17□□□□□ -0.46
CTDP1-202ENST00000299543 TREM1Q9NP99 234 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 FOXJ3Q9UPW0 622 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 SLC22A13Q9Y226 551 aa12.17□□□□□ -0.46
CTDP1-202ENST00000299543 A0A1B0GV90 55 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SLC25A12O75746 678 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 RENP00797 406 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DRD1P21728 446 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 AKR1C3P42330 323 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 MARCH3Q86UD3 253 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 OR5M1Q8NGP8 315 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SCARB1Q8WTV0 552 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 TAAR8Q969N4 342 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 FAM131CQ96AQ9 280 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 CLEC1BQ9P126 229 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SPAG17Q6Q759 2223 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 NPIPB9F8W1W9 429 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 CDC40O60508 579 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ICOSLGO75144 302 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 RBBP9O75884 186 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 CSN2P05814 226 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 CD1CP29017 333 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ARL4DP49703 201 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 RBM39Q14498 530 aaKnown RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DEFB133Q30KQ1 61 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SLC35D3Q5M8T2 416 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ACER2Q5QJU3 275 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 HLA-DQA1Q5Y7H0 255 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ZNF660Q6AZW8 331 aaPredicted RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 BAIAP2L2Q6UXY1 529 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 METTL21AQ8WXB1 218 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ZC3H10Q96K80 434 aaKnown RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 RTN4RQ9BZR6 473 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 CHMP1AQ9HD42 196 aaPredicted RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 PCDHGA5Q9Y5G8 931 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 IGHV5-51A0A0C4DH38 117 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 A0A1B0GW55 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 SDHAP31040 664 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 EFNB2P52799 333 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 TGIF1Q15583 401 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 C1orf189Q5VU69 101 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 METTL11BQ5VVY1 283 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 RAB12Q6IQ22 244 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 UNQ9370/PRO34162Q6UXP9 181 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 DND1Q8IYX4 353 aaKnown RBP12.16□□□□□ -0.46
CTDP1-202ENST00000299543 ZSCAN1Q8NBB4 408 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 PLPP7Q8NBV4 271 aa12.16□□□□□ -0.46
CTDP1-202ENST00000299543 NKD1Q969G9 470 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms