RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MEDAGQ5VYS4 303 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 SLC25A47Q6Q0C1 308 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 HDDC2Q7Z4H3 204 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 TBC1D15Q8TC07 691 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 BORCS5Q969J3 196 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF582Q96NG8 517 aaPredicted RBP13.35□□□□□ -0.27
CCDC140-201ENST00000295226 ZFP3Q96NJ6 502 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 ULBP2Q9BZM5 246 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 NMNAT2Q9BZQ4 307 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 RACGAP1Q9H0H5 632 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 GPR35Q9HC97 309 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 AMBNQ9NP70 447 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 B9D1Q9UPM9 204 aa13.35□□□□□ -0.27
CCDC140-201ENST00000295226 COA3Q9Y2R0 106 aaPredicted RBP13.35□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF182P17025 639 aaPredicted RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 SPI1P17947 270 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 PAICSP22234 425 aaKnown RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 MAP2K4P45985 399 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 CDSNQ15517 529 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 CEACAM16Q2WEN9 425 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 SLC25A30Q5SVS4 291 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 THEM4Q5T1C6 240 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 FBXW9Q5XUX1 488 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 FAM26EQ8N5C1 309 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 RELL2Q8NC24 303 aaPredicted RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 SFXN3Q9BWM7 321 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 CDCA4Q9BXL8 241 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 IGLV1-36A0A0B4J1U3 117 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 A0A1B0GUH1 482 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 EEF1E1-BLOC1S5C9J1V9 151 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 SCG5P05408 212 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 OPRM1P35372 400 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 SLC25A1P53007 311 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 OCLNQ16625 522 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 DGUOKQ16854 277 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 C4orf17Q53FE4 359 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF474Q6S9Z5 364 aaPredicted RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF367Q7RTV3 350 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 ZNF511Q8NB15 262 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 PROKR2Q8NFJ6 384 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 OR6K6Q8NGW6 343 aa13.34□□□□□ -0.27
CCDC140-201ENST00000295226 ZMYND19Q96E35 227 aaPredicted RBP13.34□□□□□ -0.27
CCDC140-201ENST00000295226 A0A1W2PPL8 197 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 IRGMA1A4Y4 181 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 CCDC182A6NF36 153 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 TVP23AA6NH52 213 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 SNTNA6NMZ2 147 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 DHHO43323 396 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 APOL3O95236 402 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 SLC2A5P22732 501 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 RPS7P62081 194 aaKnown RBP13.33□□□□□ -0.28
CCDC140-201ENST00000295226 TUBA1BP68363 451 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 IRF3Q14653 427 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 MEP1BQ16820 701 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 RNLSQ5VYX0 342 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 ZBTB46Q86UZ6 589 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 POMGNT2Q8NAT1 580 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 SMAP2Q8WU79 429 aaPredicted RBP13.33□□□□□ -0.28
CCDC140-201ENST00000295226 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 LINC00470Q9BZP3 86 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 SEC61A2Q9H9S3 476 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 H2AFY2Q9P0M6 372 aaPredicted RBP13.33□□□□□ -0.28
CCDC140-201ENST00000295226 ZNF629Q9UEG4 869 aaPredicted RBP13.33□□□□□ -0.28
CCDC140-201ENST00000295226 RPL36Q9Y3U8 105 aaKnown RBP13.33□□□□□ -0.28
CCDC140-201ENST00000295226 UGT2A1Q9Y4X1 527 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 FKBP7Q9Y680 259 aa13.33□□□□□ -0.28
CCDC140-201ENST00000295226 CENPBD1B2RD01 187 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 KHDRBS3O75525 346 aaKnown RBP13.32□□□□□ -0.28
CCDC140-201ENST00000295226 ITGA5P08648 1049 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 CD36P16671 472 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 ARF1P84077 181 aaKnown RBP13.32□□□□□ -0.28
CCDC140-201ENST00000295226 ST3GAL4Q11206 333 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 AQP6Q13520 282 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 TIGD6Q17RP2 521 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 LINC01590Q5TEZ4 76 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 NXNL2Q5VZ03 156 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 MEPCEQ7L2J0 689 aaKnown RBP13.32□□□□□ -0.28
CCDC140-201ENST00000295226 OR2T4Q8NH00 348 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 TEAD3Q99594 435 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 RHNO1Q9BSD3 238 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 B3GAT2Q9NPZ5 323 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 MALT1Q9UDY8 824 aa13.32□□□□□ -0.28
CCDC140-201ENST00000295226 ERRFI1Q9UJM3 462 aaPredicted RBP13.32□□□□□ -0.28
CCDC140-201ENST00000295226 NCOA6Q14686 2063 aaPredicted RBP13.32□□□□□ -0.28
CCDC140-201ENST00000295226 A0A096LPE4 126 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 A0A1W2PPZ6 126 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 FAM90A27PA6NNH2 459 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 DVL2O14641 736 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 ZG16O60844 167 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 LYZL6O75951 148 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 IL18BPO95998 194 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 HLA-DQA2P01906 255 aa13.31□□□□□ -0.28
CCDC140-201ENST00000295226 INHBBP09529 407 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms