RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PRTGQ2VWP7 1150 aa14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 DPPA2Q7Z7J5 298 aa14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 DERL3Q96Q80 235 aa14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 NIPSNAP3BQ9BS92 247 aa14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 RBM38Q9H0Z9 239 aaKnown RBP14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 KIF25Q9UIL4 384 aa14.04□□□□□ -0.16
SHROOM4-201ENST00000289292 MPPED1O15442 326 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SLC35E2P0CK97 266 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SSTP61278 116 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TMEM41BQ5BJD5 291 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TMEM201Q5SNT2 666 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 USP51Q70EK9 711 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CCDC190Q86UF4 302 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TRAV20A0A0B4J274 112 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SDCBPO00560 298 aaPredicted RBP14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 MAN2B1O00754 1011 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 PRAMEF4O60810 478 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CD3DP04234 171 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TPOP07202 933 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 PTHLHP12272 177 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 GZMKP49863 264 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CAMK2BQ13554 666 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 HAGHQ16775 308 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 OR14A16Q8NHC5 309 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 FN3KRPQ9HA64 309 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CMC2Q9NRP2 79 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 OR5H14A6NHG9 310 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ADAM10O14672 748 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ZFAND5O76080 213 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TSPAN12O95859 305 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 GCH1P30793 250 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CD80P33681 288 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TEKQ02763 1124 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SLC16A12Q6ZSM3 486 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 OR2G3Q8NGZ4 309 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 PLK3Q9H4B4 646 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SLC39A9Q9NUM3 307 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 GDE1Q9NZC3 331 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF346Q9UL40 294 aaKnown RBP14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 TNRC6CQ9HCJ0 1690 aaKnown RBP14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF816-ZNF321PA0A0X1KG74 233 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 IL2RGP31785 369 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 KCNAB1Q14722 419 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF321PQ8N8H1 164 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ZNF439Q8NDP4 499 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SFT2D1Q8WV19 159 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 LRP5O75197 1615 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 HTRA4P83105 476 aaPredicted RBP14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 METRNLQ641Q3 311 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 BAGE3Q86Y29 109 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 BAGE2Q86Y30 109 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 HDAC8Q9BY41 377 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 CHST11Q9NPF2 352 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 GPR173Q9NS66 373 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 ANKRD10Q9NXR5 420 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 FBXL4Q9UKA2 621 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 NPFFR2Q9Y5X5 522 aa14.03□□□□□ -0.16
SHROOM4-201ENST00000289292 SLX4Q8IY92 1834 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 BLACEA4D250 179 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 ZIC2O95409 532 aaPredicted RBP14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 OR51E1Q8TCB6 317 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 OPA3Q9H6K4 179 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 NECAP2Q9NVZ3 263 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 OSGIN2Q9Y236 505 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 TOGARAM1Q9Y4F4 1720 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 LOC107986453A0A1B0GWG9 222 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 IRS1P35568 1242 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 HOXA1P49639 335 aaPredicted RBP14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 ZBTB37Q5TC79 503 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 CNEP1R1Q8N9A8 125 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 BORCS7Q96B45 105 aa14.02□□□□□ -0.16
SHROOM4-201ENST00000289292 NME1P15531 152 aaKnown RBP14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 HNF1AP20823 631 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 BCORP1Q8N888 145 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 OR1S2Q8NGQ3 325 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 PATE1Q8WXA2 126 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 OR6C1Q96RD1 312 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 SLC25A21Q9BQT8 299 aaPredicted RBP14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 KCNE3Q9Y6H6 103 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 FGF17O60258 216 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 DDAH2O95865 285 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 ABOP16442 354 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 SCGB2A2Q13296 93 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 SNTB1Q13884 538 aaKnown RBP14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 C4orf17Q53FE4 359 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 C1orf140Q5VVS0 124 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 UMAD1C9J7I0 102 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 MCRIP1C9JLW8 97 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 MFAP5Q13361 173 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 C2orf76Q3KRA6 126 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 TMEM52BQ4KMG9 183 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 PDLIM3Q53GG5 364 aaPredicted RBP14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 SLC25A32Q9H2D1 315 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 TBC1D29Q9UFV1 150 aa14.02□□□□□ -0.17
SHROOM4-201ENST00000289292 GPR171O14626 319 aa14.01□□□□□ -0.17
SHROOM4-201ENST00000289292 BSGP35613 385 aa14.01□□□□□ -0.17
SHROOM4-201ENST00000289292 DCAF7P61962 342 aa14.01□□□□□ -0.17
SHROOM4-201ENST00000289292 ZFP62Q8NB50 900 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms