RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 EMG1Q92979 244 aaKnown RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 HINT3Q9NQE9 182 aaKnown RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 NPIPA5A0A0B4J1W7 369 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 NPIPA7E9PJI5 369 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CYTIPO60759 359 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 NPIPA8P0DM63 369 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 EPHA1P21709 976 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CCSMST1Q4G0I0 132 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 C22orf15Q8WYQ4 148 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 DNAJA3Q96EY1 480 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 SLC6A18Q96N87 628 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PLAC1Q9HBJ0 212 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PRAMEF27A3QJZ7 478 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 HMGN4O00479 90 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CXCL10P02778 98 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 METTL15P1P0C7V9 234 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 EN2P19622 333 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 HMGA2P52926 109 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 ARHGAP11BQ3KRB8 267 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PRAMEF9Q5VWM5 478 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF784Q8NCA9 323 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 NXF2Q9GZY0 626 aaKnown RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 IKZF5Q9H5V7 419 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 TP53TG5Q9Y2B4 290 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF264O43296 627 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 GSTZ1O43708 216 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 LDB3O75112 727 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CD37P11049 281 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PMPCAQ10713 525 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 COL9A2Q14055 689 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 LIMS2Q7Z4I7 341 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 LILRA3Q8N6C8 439 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 TMEM99Q8N816 258 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 THAP3Q8WTV1 239 aaPredicted RBP16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 HPNP05981 417 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CBR1P16152 277 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PJVKQ0ZLH3 352 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 CAMK2BQ13554 666 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 SMUG1Q53HV7 270 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 GLYATL3Q5SZD4 288 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 OR5M10Q6IEU7 315 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 ZDHHC22Q8N966 263 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 PPP1R35Q8TAP8 253 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 MITD1Q8WV92 249 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 TMED6Q8WW62 240 aa16.06■□□□□ 0.16
PCDHA13-201ENST00000289272 BCKDHBP21953 392 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 AADACP22760 399 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 GABRR1P24046 479 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 DTWD2Q8NBA8 298 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 OR2G3Q8NGZ4 309 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 DSCR3O14972 297 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 NSA2O95478 260 aaKnown RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 DDAH2O95865 285 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 MBP02144 154 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 C1QAP02745 245 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 CLINT1Q14677 625 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 GSG1Q2KHT4 349 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 TCTN3Q6NUS6 607 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 NKX3-1Q99801 234 aaPredicted RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 PATZ1Q9HBE1 687 aaKnown RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 RHOFQ9HBH0 211 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 V9GYS6 101 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 ELOA3CA0A087WX78 387 aaPredicted RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 PRICKLE3O43900 615 aaPredicted RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 CCNOP22674 350 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 CATR1Q13166 79 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 PAQR6Q6TCH4 344 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 RCBTB1Q8NDN9 531 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 OR1E3Q8WZA6 343 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 INHBBP09529 407 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF28P17035 718 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 SLC6A1P30531 599 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 P2RX1P51575 399 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 TMEM31Q5JXX7 168 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 C9orf62Q8N4C0 152 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 NAXEQ8NCW5 288 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 MYEOVQ96EZ4 313 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 NMNAT3Q96T66 252 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 SELENOIQ9C0D9 397 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
PCDHA13-201ENST00000289272 TRAV20A0A0B4J274 112 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF93P35789 620 aaPredicted RBP16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 IL10RAQ13651 578 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 AGBL4Q5VU57 503 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 RPUSD3Q6P087 351 aaKnown RBP16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 TMEM81Q6P7N7 255 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF808Q8N4W9 903 aaPredicted RBP16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 BVESQ8NE79 360 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 LRIT1Q9P2V4 623 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 ICAM2P13598 275 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 PTCRAQ6ISU1 281 aaPredicted RBP16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 PPP1R3BQ86XI6 285 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 BAGE3Q86Y29 109 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 BAGE2Q86Y30 109 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 OR4D6Q8NGJ1 314 aa16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 DVL3Q92997 716 aaPredicted RBP16.04■□□□□ 0.16
PCDHA13-201ENST00000289272 ASPDHA6ND91 283 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms