RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CD300CQ08708 224 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 POU4F2Q12837 409 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 PDCD1Q15116 288 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 CTF1Q16619 201 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 SLC16A12Q6ZSM3 486 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 PAQR8Q8TEZ7 354 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 ABHD17AQ96GS6 310 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 MRGPRX4Q96LA9 322 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 ASCL3Q9NQ33 180 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 ENPP5Q9UJA9 477 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 NOSIPQ9Y314 301 aaKnown RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 CORINQ9Y5Q5 1042 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 CUBNO60494 3623 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 C1QTNF9BB2RNN3 333 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 TLX3O43711 291 aaPredicted RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 UPK3AO75631 287 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 LYZL6O75951 148 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 SYNGR4O95473 234 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 C1QTNF9P0C862 333 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 BMP5P22003 454 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 NKX2-5P52952 324 aaPredicted RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 TBCEQ15813 527 aaPredicted RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 OR10K2Q6IF99 312 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 PLPP7Q8NBV4 271 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 OR52N5Q8NH56 324 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 ST8SIA1Q92185 356 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 NR4A3Q92570 626 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 KCTD7Q96MP8 289 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 LRFN5Q96NI6 719 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 SOX7Q9BT81 388 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 PPIL3Q9H2H8 161 aaKnown RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 PROK2Q9HC23 129 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 TXNL4BQ9NX01 149 aaKnown RBP10.38□□□□□ -0.75
LIN28A-201ENST00000254231 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
LIN28A-201ENST00000254231 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 KLF4O43474 513 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 IGHEP01854 428 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 HLA-HP01893 362 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 FAM131AQ6UXB0 335 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 FAM57BQ71RH2 274 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 KRT74Q7RTS7 529 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 C11orf40Q8WZ69 217 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 SLC25A19Q9HC21 320 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 B3GAT2Q9NPZ5 323 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 LOC102723996A0A087X1L8 192 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 SLC22A23A1A5C7 686 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 GABRPO00591 440 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 SNPHO15079 494 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 LMX1BO60663 402 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 IGHG1P01857 330 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 RRADP55042 308 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 CTBP2P56545 445 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 GABARAPL2P60520 117 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 SELENBP1Q13228 472 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 OCLNQ16625 522 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 RPL13AP3Q6NVV1 102 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 KLHL24Q6TFL4 600 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF517Q6ZMY9 492 aaPredicted RBP10.37□□□□□ -0.75
LIN28A-201ENST00000254231 DCDC5Q6ZRR9 648 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 PELI1Q96FA3 418 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ABHD6Q9BV23 337 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 TXNIPQ9H3M7 391 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 DIMT1Q9UNQ2 313 aaKnown RBP10.37□□□□□ -0.75
LIN28A-201ENST00000254231 HELZ2Q9BYK8 2649 aaKnown RBP10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ANKRD33BA6NCL7 494 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ACOT7O00154 380 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 EFSO43281 561 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 RAD51DO75771 328 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 HTR3AP46098 478 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF85Q03923 595 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 CEACAM16Q2WEN9 425 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ZMAT1Q5H9K5 638 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF227Q86WZ6 799 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 LAX1Q8IWV1 398 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 RPRMLQ8N4K4 120 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 CAPSLQ8WWF8 208 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 RBM38Q9H0Z9 239 aaKnown RBP10.37□□□□□ -0.75
LIN28A-201ENST00000254231 NKIRAS2Q9NYR9 191 aa10.37□□□□□ -0.75
LIN28A-201ENST00000254231 LOC110117498-PIK3R3F6TDL0 507 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 IL18Q14116 193 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 PYDC2Q56P42 97 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 SFRP5Q5T4F7 317 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 ABHD12BQ7Z5M8 362 aaPredicted RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 MISPQ8IVT2 679 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 ALDH16A1Q8IZ83 802 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 SAMD12Q8N8I0 201 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 PMM1Q92871 262 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TMEM106AQ96A25 262 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 MIB2Q96AX9 1013 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 MS4A3Q96HJ5 214 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 GPER1Q99527 375 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TMA7Q9Y2S6 64 aaKnown RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 EXOSC1Q9Y3B2 195 aaKnown RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TRGV5A0A0B4J1U4 118 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 GLCEO94923 617 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 GUSBP08236 651 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 PSKH1P11801 424 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms