RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NMD3Q96D46 503 aaKnown RBP17.97■□□□□ 0.47
NEDD8-201ENST00000250495 TPD52L3Q96J77 140 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 LRRC37BQ96QE4 947 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 ALG12Q9BV10 488 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 OCEL1Q9H607 264 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 SAR1AQ9NR31 198 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 UGT2A1Q9Y4X1 527 aa17.97■□□□□ 0.47
NEDD8-201ENST00000250495 A0A0A6YYJ9 748 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 TRAV20A0A0B4J274 112 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 IGHV1-69-2A0A0G2JMI3 117 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 FAM220BPB1ANY3 271 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 IFI30P13284 250 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 ITGA2P17301 1181 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 GCH1P30793 250 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 GDI2P50395 445 aaKnown RBP17.96■□□□□ 0.47
NEDD8-201ENST00000250495 FAM27BQ5VT28 67 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 ALDH16A1Q8IZ83 802 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 TEX29Q8N6K0 151 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 OR2T12Q8NG77 320 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 LZICQ8WZA0 190 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 BPIFA2Q96DR5 249 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 POM121L2Q96KW2 1035 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 PRRC1Q96M27 445 aa17.96■□□□□ 0.47
NEDD8-201ENST00000250495 METTL17Q9H7H0 456 aaPredicted RBP17.96■□□□□ 0.47
NEDD8-201ENST00000250495 ELOVL7A1L3X0 281 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 RPL27P61353 136 aaKnown RBP17.95■□□□□ 0.46
NEDD8-201ENST00000250495 FMODQ06828 376 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 HFEQ30201 348 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 ACSM5Q6NUN0 579 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 SHQ1Q6PI26 577 aaKnown RBP17.95■□□□□ 0.46
NEDD8-201ENST00000250495 MICU2Q8IYU8 434 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 CCDC197Q8NCU1 140 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 A4GNTQ9UNA3 340 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 AP3M1Q9Y2T2 418 aa17.95■□□□□ 0.46
NEDD8-201ENST00000250495 IGKV1D-43A0A0B4J1Z2 117 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 C5orf49A4QMS7 147 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 CST2P09228 141 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 ZNF81P51508 661 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 CTXN1P60606 82 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 PCBD1P61457 104 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 PSG4Q00888 419 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 MVKQ03426 396 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 TOP3AQ13472 1001 aaPredicted RBP17.94■□□□□ 0.46
NEDD8-201ENST00000250495 TSTQ16762 297 aaKnown RBP17.94■□□□□ 0.46
NEDD8-201ENST00000250495 ANKDD1AQ495B1 522 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 FAM209AQ5JX71 171 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 FAM205BPQ63HN1 556 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 FAHD2BQ6P2I3 314 aaPredicted RBP17.94■□□□□ 0.46
NEDD8-201ENST00000250495 USP51Q70EK9 711 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 AKR7LQ8NHP1 331 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 RAB39BQ96DA2 213 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 ELMOD3Q96FG2 381 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 FAHD2AQ96GK7 314 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 TIMD4Q96H15 378 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 ZNF665Q9H7R5 613 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 SAP30LQ9HAJ7 183 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 FGFR1OP2Q9NVK5 253 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 TIMM10BQ9Y5J6 103 aa17.94■□□□□ 0.46
NEDD8-201ENST00000250495 LOC100509620A0A075B734 347 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 PLSCR5A0PG75 271 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 CLDN25C9JDP6 229 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 PIP5K1CO60331 668 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 IGHMP01871 453 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 LIPAP38571 399 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 ERVK-25P63136 954 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 GLO1Q04760 184 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 SF3A3Q12874 501 aaKnown RBP eCLIP17.93■□□□□ 0.464e-7■■■□□ 16.8
NEDD8-201ENST00000250495 AVPI1Q5T686 147 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 ZNF101Q8IZC7 436 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 RAB1CQ92928 201 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 MARS2Q96GW9 593 aaKnown RBP17.93■□□□□ 0.46
NEDD8-201ENST00000250495 FNDC11Q9BVV2 318 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 CYSLTR2Q9NS75 346 aa17.93■□□□□ 0.46
NEDD8-201ENST00000250495 A6NIZ1 184 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 SNX3O60493 162 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 PNPP00491 289 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 LAP3P28838 519 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 WNT5AP41221 380 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 RAP1BP61224 184 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 RAP1AP62834 184 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 TRAM2Q15035 370 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 MBNL2Q5VZF2 373 aaKnown RBP17.92■□□□□ 0.46
NEDD8-201ENST00000250495 RNF113BQ8IZP6 322 aaKnown RBP17.92■□□□□ 0.46
NEDD8-201ENST00000250495 OR51A7Q8NH64 312 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 SLC25A40Q8TBP6 338 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 ZFAND2BQ8WV99 257 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 OR2H1Q9GZK4 316 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 EGLN1Q9GZT9 426 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 ELOVL3Q9HB03 270 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 WIPI2Q9Y4P8 454 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 CAPN7Q9Y6W3 813 aa17.92■□□□□ 0.46
NEDD8-201ENST00000250495 SLC22A2O15244 555 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 SPRY3O43610 288 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 MPZL1O95297 269 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 IFNW1P05000 195 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 MAKP20794 623 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 YAP1P46937 504 aaKnown RBP17.91■□□□□ 0.46
NEDD8-201ENST00000250495 SLC9A3P48764 834 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 MMP15P51511 669 aa17.91■□□□□ 0.46
NEDD8-201ENST00000250495 PRKCDQ05655 676 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms