RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CREBBPQ92793 2442 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 H3BUI4 141 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CNOT4O95628 575 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 GLI4P10075 376 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 NAGAP17050 411 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ELOCQ15369 112 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TSC22D1Q15714 1073 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FAM209AQ5JX71 171 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PRAMEF20Q5VT98 475 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ANGPTL6Q8NI99 470 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FBRSQ9HAH7 460 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 KCNIP3Q9Y2W7 256 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FNDC1Q4ZHG4 1894 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TRBV11-1A0A0K0K1C0 115 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TBX19O60806 448 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 EML2O95834 649 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CALCBP10092 127 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SLC2A1P11166 492 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CX3CR1P49238 355 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TAS2R31P59538 309 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SRSF5Q13243 272 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MFSD13AQ14CX5 517 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZIC1Q15915 447 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PLEKHN1Q494U1 663 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 VN1R4Q7Z5H5 301 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 KTI12Q96EK9 354 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR5B2Q96R09 309 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR5V1Q9UGF6 321 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FREM1Q5H8C1 2179 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FAM230AA0A1W2PPH8 454 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 K7EPK0 472 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TNFSF12O43508 249 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 IL5P05113 134 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 HTR2CP28335 458 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CSNK1A1P48729 337 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CLPPQ16740 277 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 C2orf76Q3KRA6 126 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FJX1Q86VR8 437 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PLXDC1Q8IUK5 500 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FAM71E2Q8N5Q1 922 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 C19orf47Q8N9M1 422 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF416Q9BWM5 594 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TINAGL1Q9GZM7 467 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 EHFQ9NZC4 300 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PLXNA3P51805 1871 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PRAMEF27A3QJZ7 478 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 D6RAR5 112 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 IMPA2O14732 288 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MOSPD3O75425 235 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 PET100P0DJ07 73 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MYF5P13349 255 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SERPINA2P20848 420 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 POU3F1Q03052 451 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 GLO1Q04760 184 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SLC17A1Q14916 467 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ACKR1Q16570 336 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 C17orf107Q6ZR85 190 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 RCBTB1Q8NDN9 531 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 MARC2Q969Z3 335 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 S100PBPQ96BU1 408 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 DLL4Q9NR61 685 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 HRH3Q9Y5N1 445 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TP53I11O14683 189 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZFPL1O95159 310 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 POU3F2P20265 443 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ALOX5APP20292 161 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 DRD1P21728 446 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF84P51523 738 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 EPHA4P54764 986 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CYCSP99999 105 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CD300LDQ6UXZ3 194 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ZAR1Q86SH2 424 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CMIPQ8IY22 773 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 GABRG1Q8N1C3 465 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ESX1Q8N693 406 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 BCORP1Q8N888 145 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 EMC3Q9P0I2 261 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CSAG2Q9Y5P2 127 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 CCDC163A0A0D9SF12 145 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SNRPGP15A8MWD9 76 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TSPAN15O95858 294 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 OR8U9P0C7N5 309 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 C1orf140Q5VVS0 124 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TMPRSS11FQ6ZWK6 438 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 LRRTM1Q86UE6 522 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SMIM4Q8WVI0 70 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 HSD17B8Q92506 261 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 TCTN2Q96GX1 697 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 GMEB2Q9UKD1 530 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 LRRK1Q38SD2 2015 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 SULT2B1O00204 365 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 ACHEP22303 614 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 EEF1A1P68104 462 aaKnown RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 LGALSLQ3ZCW2 172 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-201ENST00000249837 FAM71CQ8NEG0 241 aa4.2□□□□□ -1.74
VPS13C-201ENST00000249837 C19orf25Q9UFG5 118 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms