RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 THRSPQ92748 146 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 SLC25A46Q96AG3 418 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 ZNF385AQ96PM9 386 aaKnown RBP12.6□□□□□ -0.39
SDF2-201ENST00000247020 CDADC1Q9BWV3 514 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 TTTY10Q9BZA0 68 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 MCTS1Q9ULC4 181 aaKnown RBP12.6□□□□□ -0.39
SDF2-201ENST00000247020 GRIP1Q9Y3R0 1128 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 ALPK2Q86TB3 2170 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 SLC43A1O75387 559 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 SYNGR4O95473 234 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 IGHG3P01860 377 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 INHBBP09529 407 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 OR8G3PP0DMU2 310 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 CPN1P15169 458 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 CFL1P23528 166 aaKnown RBP12.6□□□□□ -0.39
SDF2-201ENST00000247020 DCTDP32321 178 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 RPS19P39019 145 aaKnown RBP12.6□□□□□ -0.39
SDF2-201ENST00000247020 MTNR1BP49286 362 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 CCR9P51686 369 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 RIDAP52758 137 aaKnown RBP12.6□□□□□ -0.39
SDF2-201ENST00000247020 SLC3A1Q07837 685 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 C20orf196Q8IYI0 205 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 OR6N1Q8NGY5 312 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 RNF128Q8TEB7 428 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 C11orf40Q8WZ69 217 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 GHSRQ92847 366 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 ABHD6Q9BV23 337 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 HDHD5Q9BXW7 423 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
SDF2-201ENST00000247020 TRGV5A0A0B4J1U4 118 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 MAGEB4O15481 346 aaPredicted RBP12.59□□□□□ -0.39
SDF2-201ENST00000247020 CDRT1O95170 752 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 PSKH1P11801 424 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 GUCA1AP43080 201 aaPredicted RBP12.59□□□□□ -0.39
SDF2-201ENST00000247020 LSM6P62312 80 aaKnown RBP12.59□□□□□ -0.39
SDF2-201ENST00000247020 STK11Q15831 433 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 MEP1BQ16820 701 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 CARD17Q5XLA6 110 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 LRFN4Q6PJG9 635 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 KRT77Q7Z794 578 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 TPRA1Q86W33 373 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 ST7LQ8TDW4 575 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 RNF133Q8WVZ7 376 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 NSMAFQ92636 917 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
SDF2-201ENST00000247020 DCBLD2Q96PD2 775 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 LDAHQ9H6V9 325 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 HMG20AQ9NP66 347 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 B3GAT2Q9NPZ5 323 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 SLCO1C1Q9NYB5 712 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 EMC3Q9P0I2 261 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
SDF2-201ENST00000247020 ZNF281Q9Y2X9 895 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 PEX16Q9Y5Y5 336 aa12.59□□□□□ -0.39
SDF2-201ENST00000247020 IQCMA0A1B0GVH7 501 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 A0A1W2PPL8 197 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 CD8B2A6NJW9 211 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 LRRTM2O43300 516 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 DHHO43323 396 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 ARL6IP5O75915 188 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 CD8BP10966 210 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 ZNF24P17028 368 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 ZNF84P51523 738 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 UNQ9370/PRO34162Q6UXP9 181 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 DCXRQ7Z4W1 244 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 AP3S1Q92572 193 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 FOXN4Q96NZ1 517 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 AMELYQ99218 206 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 WDR12Q9GZL7 423 aaKnown RBP12.58□□□□□ -0.4
SDF2-201ENST00000247020 COMMD4Q9H0A8 199 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 C1orf198Q9H425 327 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 CSAG2Q9Y5P2 127 aa12.58□□□□□ -0.4
SDF2-201ENST00000247020 FREM2Q5SZK8 3169 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 TRAV1-2A0A0B4J238 106 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 A0A1B0GVC2 190 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 OR6C65A6NJZ3 312 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 CASKO14936 926 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 TFECO14948 347 aaPredicted RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 MPZL1O95297 269 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 MYL9P24844 172 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 MAPK3P27361 379 aaPredicted RBP12.57□□□□□ -0.4
SDF2-201ENST00000247020 S100A5P33763 92 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 SDC2P34741 201 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 PSMB10P40306 273 aa12.57□□□□□ -0.4
SDF2-201ENST00000247020 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms