RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 TRMT12Q53H54 448 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 XAF1Q6GPH4 301 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 RNF150Q9ULK6 438 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 PIGLQ9Y2B2 252 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 PCDHGA9Q9Y5G4 932 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 NID1P14543 1247 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 HOXA1P49639 335 aaPredicted RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 POLR2HP52434 150 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 ASAH1Q13510 395 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CCINQ13939 588 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 RPL22L1Q6P5R6 122 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 ZNF440Q8IYI8 595 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 FAM58AQ8N1B3 248 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SPTSSAQ969W0 71 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 MYADMQ96S97 322 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 NDRG4Q9ULP0 352 aaKnown RBP6.9□□□□□ -1.3
RIF1-201ENST00000243326 H0Y8X5 98 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 ZNF205O95201 554 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 UTS2O95399 124 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 P04436 131 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 RFC3P40938 356 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 RAP1AP62834 184 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 SLC22A25Q6T423 547 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 GDPGP1Q6ZNW5 385 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CLDN22Q8N7P3 220 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CNEP1R1Q8N9A8 125 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 CDRT4Q8N9R6 151 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 THRSPQ92748 146 aa6.9□□□□□ -1.3
RIF1-201ENST00000243326 A0A1W2PPV4 95 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 TCRBV5S1A1TA0A578 114 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 MSTNO14793 375 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 UBL3O95164 117 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 OR2T2Q6IF00 324 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 NICN1Q9BSH3 213 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 MBNL1Q9NR56 388 aaKnown RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 KCNE3Q9Y6H6 103 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 LEUTXA8MZ59 168 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 CLN5O75503 358 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 SDHAP31040 664 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 RFX2P48378 723 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 OVCH1Q7RTY7 1134 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 OR6V1Q8N148 313 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 DHCR7Q9UBM7 475 aaKnown RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 HTR1FP30939 366 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 PRTGQ2VWP7 1150 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 IL34Q6ZMJ4 242 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 SIRT6Q8N6T7 355 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 PGAP3Q96FM1 320 aaPredicted RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 A0A0J9YY10 115 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 OR5H14A6NHG9 310 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 MBP02144 154 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 KLK3P07288 261 aaPredicted RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 HTR3AP46098 478 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 TMEM267Q0VDI3 215 aaPredicted RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 B3GNT9Q6UX72 402 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 THOC3Q96J01 351 aaKnown RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 OR10A2Q9H208 303 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 NKX2-4Q9H2Z4 354 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 ARL2-SNX15V9GYD0 113 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 DDX60LQ5H9U9 1706 aaKnown RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 ATP1B1P05026 303 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 SFTA3P0C7M3 94 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 ATPAF1Q5TC12 328 aaPredicted RBP6.9□□□□□ -1.31
RIF1-201ENST00000243326 MDGA2Q7Z553 956 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 OBP2BQ9NPH6 170 aa6.9□□□□□ -1.31
RIF1-201ENST00000243326 HIST1H1TP22492 207 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 GDF1P27539 372 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 NOGQ13253 232 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 NCMAPQ5T1S8 102 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 AFMIDQ63HM1 303 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 PTRH1Q86Y79 214 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 LRFN5Q96NI6 719 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SYT3Q9BQG1 590 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 KLK4Q9Y5K2 254 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 HLA-HP01893 362 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ACSM1Q08AH1 577 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 FAM122BQ7Z309 247 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 DCXRQ7Z4W1 244 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 OR5M8Q8NGP6 311 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ZNF75AQ96N20 296 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CACNA1SQ13698 1873 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 GUSBP08236 651 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 LAP3P28838 519 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 EDDM3AQ14507 147 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 EOGTQ5NDL2 527 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 MAP3K3Q99759 626 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SPHK1Q9NYA1 384 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ABCA2Q9BZC7 2435 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 MMP7P09237 267 aaPredicted RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 MPGP29372 298 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 TIMM29Q9BSF4 260 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 CPEB1Q9BZB8 566 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 COL14A1Q05707 1796 aaKnown RBP6.89□□□□□ -1.31
RIF1-201ENST00000243326 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 MTHFD2P13995 350 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 AVPR2P30518 371 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SLC7A9P82251 487 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 SP6Q3SY56 376 aa6.89□□□□□ -1.31
RIF1-201ENST00000243326 ANGPTL6Q8NI99 470 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms