RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Hsh2dQ6VYH9 334 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Impad1Q80V26 356 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Galnt12Q8BGT9 576 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Zpld1Q8BGZ8 415 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rnd1Q8BLR7 232 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 NrrosQ8BMT4 693 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rad51ap1Q8C551 337 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Lrrn3Q8CBC6 707 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Cdc123Q8CII2 336 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Mtg1Q8R2R6 326 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Ugt2b37Q8VCN3 530 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr108Q8VFA1 320 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr768Q8VGC4 312 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Il25Q8VHH8 169 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pear1Q8VIK5 1034 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr642Q924X8 314 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 4931417E11RikQ9CR05 305 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Tm7sf3Q9CRG1 565 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 GrifinQ9D1U0 144 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 OxsmQ9D404 459 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Emc9Q9DB76 206 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Cfap46E9Q2C0 2641 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pkd1l3Q2EG98 2201 aa13.09□□□□□ -0.31
Ercc1-201ENSMUST00000003645 TrdcA0A0G2JEU3 153 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr560A0A1B0GSU5 314 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gm5072A2AHM1 344 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 LexmA2AVQ5 414 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r137D3YTY1 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r143E9PUW9 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r157E9Q069 297 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r139E9Q8L6 297 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Maml2F6U238 1170 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pcdh1F7BJK1 1077 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r112G3UY48 297 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r103K7N6X7 305 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r122K7N726 305 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r135K9J7G0 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r125L7N227 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r151L7N288 305 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r116L7N2A6 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Hprt1P00493 218 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Efnb1P52795 345 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Csnk2bP67871 215 aaKnown RBP13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Cpeb1P70166 561 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 DtymkP97930 212 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Lsg1Q3UM18 644 aaKnown RBP13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Magee2Q52KG3 523 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rab3ipQ68EF0 428 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Gm10283Q8C3L5 117 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Pars2Q8CFI5 475 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Olfr826Q8VFU6 313 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Plpp7Q91WB2 271 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 AmnQ99JB7 458 aaKnown RBP13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Park7Q99LX0 189 aaKnown RBP13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 SostQ99P68 211 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Rnf128Q9D304 428 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Med29Q9DB91 199 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Vmn1r100Q9EPS5 307 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Aldh9a1Q9JLJ2 494 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Hipk2Q9QZR5 1196 aa13.08□□□□□ -0.31
Ercc1-201ENSMUST00000003645 Nup214Q80U93 2085 aa13.08□□□□□ -0.32
Ercc1-201ENSMUST00000003645 SpenQ62504 3644 aaKnown RBP13.08□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Col6a6Q8C6K9 2265 aa13.08□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Fbn2Q61555 2907 aa13.08□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Gm39566A0A1B0GT45 1251 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Skint10A7TZG1 354 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Zfp563B8JJZ9 448 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 PtprhE9Q0N2 971 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Zfp707F6QUN2 391 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Gm8888J3QPX5 126 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 C1dO35473 141 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 DdostO54734 441 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Wsb1O54927 421 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Itln1O88310 313 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Klk1b16P04071 261 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Il6P08505 211 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Gpd1P13707 349 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Acvr2aP27038 513 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Elk1P41969 429 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Rpl5P47962 297 aaKnown RBP13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 AgrpP56473 131 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Rap1aP62835 184 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Ms4a15Q3UPL6 245 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Arhgef9Q3UTH8 516 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Clcn4Q61418 747 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 ArsjQ8BM89 598 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 C130079G13RikQ8BUY2 280 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 MetrnQ8C1Q4 291 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Flywch1Q8CI03 673 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Steap3Q8CI59 488 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Eddm3bQ8K0E4 149 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Prkd3Q8K1Y2 889 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Padi6Q8K3V4 682 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Trib3Q8K4K2 354 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Vmn1r231Q8R2A3 311 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Znf385aQ8VD12 386 aaKnown RBP13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Srsf4Q8VE97 489 aaKnown RBP13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Olfr558Q8VGZ7 317 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Rap1bQ99JI6 184 aa13.07□□□□□ -0.32
Ercc1-201ENSMUST00000003645 Arl4dQ99PE9 201 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms