RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Wbp1P97764 304 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Tdpoz5Q6YCH1 340 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr487Q7TRU9 314 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Foxj3Q8BUR3 623 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Lrrn3Q8CBC6 707 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Csnka2ipQ8CH19 720 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr73Q920P2 313 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Q9D4G1 230 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr576A0A0G2JFH3 312 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Aadacl3A2A7Z8 408 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Klhl15A2AAX3 604 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Usp36B1AQJ2 1098 aaKnown RBP14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 4933403O08RikF6UK53 379 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm8871F7AXK2 190 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 HexaP29416 528 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Ly6fP35460 134 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 DhpsQ3TXU5 369 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Ltc4sQ60860 150 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Traf4Q61382 470 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 CmahQ61419 577 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Tgfbr2Q62312 592 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Zc3h12dQ8BIY3 533 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmbim1Q8BJZ3 309 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Arfrp1Q8BXL7 201 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Pxdc1Q8JZU6 231 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Gpx4Q91XR9 253 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Pcdhgb5Q91XX5 926 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Cdca3Q99M54 266 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 NmbQ9CR53 121 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Dusp12Q9D0T2 339 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Ptp4a3Q9D658 173 aa14.95□□□□□ -0.02
Shh-201ENSMUST00000002708 Exph5Q0VAV2 1960 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Hacd4A2AKM2 232 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Xlr4aA2BI40 215 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm21820J3KMU2 361 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 AanatO88816 205 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 ChrndP02716 520 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 LcatP16301 438 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 PvalbP32848 110 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 S100gP97816 79 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Xlr4cQ3TKR2 215 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Lrrc28Q3TX51 367 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Vmn1r196Q5SVD5 301 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Lrrc75aQ7TSF4 339 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1143Q8VEU8 314 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr531Q8VGL2 304 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Asb15Q8VHS6 583 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Rtn4ip1Q924D0 396 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Mfsd1Q9DC37 464 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Trim2Q9ESN6 744 aaKnown RBP14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Xlr4bQ9JJQ7 215 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Ranbp2Q9ERU9 3053 aaKnown RBP14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm21149A0A0G2JFY7 255 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Fam83cA2ARK0 776 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Tmem178bM0QWJ9 172 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Opn1mwO35599 359 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 P01654 111 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 P01656 111 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 P03977 111 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Cxcl5P50228 132 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 CckbrP56481 453 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Kcnab1P63143 401 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Kansl1Q80TG1 1036 aaKnown RBP14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Acaa2Q8BWT1 397 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Stbd1Q8C7E7 338 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 4933402N03RikQ8CDT9 329 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Akr7a2Q8CG76 367 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Cml2Q8CHQ9 238 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1378Q8VGH0 315 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Q9CRW3 126 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Cdca4Q9CWM2 237 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Cldn12Q9ET43 244 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 DiabloQ9JIQ3 237 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 FancmQ8BGE5 2021 aa14.94□□□□□ -0.02
Shh-201ENSMUST00000002708 Lrp4Q8VI56 1905 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Pom121l12A0A1B0GSJ4 278 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1084A0A1L1STZ9 313 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr1112A2ATA0 318 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm9493F6SVV1 192 aaKnown RBP14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Gm8857L7N291 182 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Slc16a7O70451 484 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 CtgfP29268 348 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Zrsr1Q64707 428 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Impad1Q80V26 356 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Hapln3Q80WM5 359 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Agpat2Q8K3K7 278 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Olfr644Q8VH21 314 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Chmp1aQ921W0 196 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Tpra1Q99MU1 369 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Actr6Q9D864 396 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Plxdc2Q9DC11 530 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Nqo2Q9JI75 231 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Mbd4Q9Z2D7 554 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Cyp4a31F8WGU9 509 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Gpr52P0C5J4 361 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Acta2P62737 377 aaKnown RBP14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Actg2P63268 376 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Wfdc5Q4KXB6 126 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Tspan9Q8BJU2 239 aa14.93□□□□□ -0.02
Shh-201ENSMUST00000002708 Q8C784 167 aa14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 61.1 ms