RNA–Protein interactions for RNA: YNL212W

VID27, Transcript of Cytoplasmic protein of unknown function, yeast

Gene VID27, Length 2,349 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID27	YNL212W	ELA1	P53861	379 aa	Predicted RBP	4.11	□□□□□ -1.75
VID27	YNL212W	SPO71	Q03868	1245 aa		4.11	□□□□□ -1.75
VID27	YNL212W	YKU80	Q04437	629 aa		4.11	□□□□□ -1.75
VID27	YNL212W	MMR1	Q06324	491 aa		4.11	□□□□□ -1.75
VID27	YNL212W	YPR172W	Q06608	200 aa		4.11	□□□□□ -1.75
VID27	YNL212W	HBN1	Q96VH4	193 aa		4.11	□□□□□ -1.75
VID27	YNL212W	TOP3	P13099	656 aa		4.11	□□□□□ -1.75
VID27	YNL212W	CCC2	P38995	1004 aa		4.11	□□□□□ -1.75
VID27	YNL212W	QRI7	P43122	407 aa		4.11	□□□□□ -1.75
VID27	YNL212W	RET2	P43621	546 aa		4.11	□□□□□ -1.75
VID27	YNL212W	CIT3	P43635	486 aa		4.11	□□□□□ -1.75
VID27	YNL212W	ISM1	P48526	1002 aa		4.11	□□□□□ -1.75
VID27	YNL212W	MON1	P53129	644 aa		4.11	□□□□□ -1.75
VID27	YNL212W	YGR035C	P53222	116 aa		4.11	□□□□□ -1.75
VID27	YNL212W	MRPL19	P53875	158 aa		4.11	□□□□□ -1.75
VID27	YNL212W	TDA9	Q04545	1251 aa		4.11	□□□□□ -1.75
VID27	YNL212W	ESC8	Q08119	714 aa		4.11	□□□□□ -1.75
VID27	YNL212W	YTM1	Q12024	460 aa	Predicted RBP	4.11	□□□□□ -1.75
VID27	YNL212W	LAM4	P38800	1345 aa		4.11	□□□□□ -1.75
VID27	YNL212W	SAC3	P46674	1301 aa		4.11	□□□□□ -1.75
VID27	YNL212W	MYO1	P08964	1928 aa		4.1	□□□□□ -1.75
VID27	YNL212W	STF1	P01098	86 aa		4.1	□□□□□ -1.75
VID27	YNL212W	RAD18	P10862	487 aa		4.1	□□□□□ -1.75
VID27	YNL212W	BET2	P20133	325 aa		4.1	□□□□□ -1.75
VID27	YNL212W	RAD53	P22216	821 aa		4.1	□□□□□ -1.75
VID27	YNL212W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
VID27	YNL212W	NUD1	P32336	851 aa		4.1	□□□□□ -1.75
VID27	YNL212W	MUD2	P36084	527 aa	Known RBP	4.1	□□□□□ -1.75
VID27	YNL212W	MIC60	P36112	540 aa		4.1	□□□□□ -1.75
VID27	YNL212W	PSY4	P38193	441 aa		4.1	□□□□□ -1.75
VID27	YNL212W	OAF1	P39720	1047 aa	Predicted RBP	4.1	□□□□□ -1.75
VID27	YNL212W	AGE1	Q04412	482 aa		4.1	□□□□□ -1.75
VID27	YNL212W	YDR344C	Q05510	147 aa		4.1	□□□□□ -1.75
VID27	YNL212W	SES1	P07284	462 aa	Known RBP	4.1	□□□□□ -1.75
VID27	YNL212W	RED1	P14291	827 aa		4.1	□□□□□ -1.75
VID27	YNL212W	AAC3	P18238	307 aa		4.1	□□□□□ -1.75
VID27	YNL212W	SUI2	P20459	304 aa	Known RBP	4.1	□□□□□ -1.75
VID27	YNL212W	CMK1	P27466	446 aa	Known RBP	4.1	□□□□□ -1.75
VID27	YNL212W	FUN30	P31380	1131 aa		4.1	□□□□□ -1.75
VID27	YNL212W	ORC2	P32833	620 aa		4.1	□□□□□ -1.75
VID27	YNL212W	APM2	P38700	605 aa		4.1	□□□□□ -1.75
VID27	YNL212W	SAH1	P39954	449 aa	Known RBP	4.1	□□□□□ -1.75
VID27	YNL212W	UBP10	P53874	792 aa	Predicted RBP	4.1	□□□□□ -1.75
VID27	YNL212W	PEX29	Q03370	554 aa		4.1	□□□□□ -1.75
VID27	YNL212W	ARA2	Q04212	335 aa		4.1	□□□□□ -1.75
VID27	YNL212W	BRE4	Q07660	1125 aa		4.1	□□□□□ -1.75
VID27	YNL212W	TAH18	Q12181	623 aa		4.1	□□□□□ -1.75
VID27	YNL212W	SEC18	P18759	758 aa	Known RBP	4.09	□□□□□ -1.75
VID27	YNL212W	MBR1	P23493	339 aa		4.09	□□□□□ -1.75
VID27	YNL212W	PUP3	P25451	205 aa	Known RBP	4.09	□□□□□ -1.75
VID27	YNL212W	VMA3	P25515	160 aa		4.09	□□□□□ -1.75
VID27	YNL212W	UGA3	P26370	528 aa		4.09	□□□□□ -1.75
VID27	YNL212W	HEM12	P32347	362 aa	Predicted RBP	4.09	□□□□□ -1.75
VID27	YNL212W	RER2	P35196	286 aa		4.09	□□□□□ -1.75
VID27	YNL212W	SAF1	P38352	637 aa		4.09	□□□□□ -1.75
VID27	YNL212W	UPF3	P48412	387 aa	Known RBP	4.09	□□□□□ -1.75
VID27	YNL212W	YAP1802	P53309	568 aa		4.09	□□□□□ -1.75
VID27	YNL212W	TAF11	Q04226	346 aa		4.09	□□□□□ -1.75
VID27	YNL212W	BLS1	Q06071	122 aa		4.09	□□□□□ -1.75
VID27	YNL212W	RMP1	Q12530	201 aa		4.09	□□□□□ -1.75
VID27	YNL212W	CDC9	P04819	755 aa		4.09	□□□□□ -1.76
VID27	YNL212W	HTA1	P04911	132 aa	Known RBP	4.09	□□□□□ -1.76
VID27	YNL212W	HTA2	P04912	132 aa		4.09	□□□□□ -1.76
VID27	YNL212W	SRD1	P09007	221 aa		4.09	□□□□□ -1.76
VID27	YNL212W	SFL1	P20134	766 aa		4.09	□□□□□ -1.76
VID27	YNL212W	PCL2	P25693	308 aa		4.09	□□□□□ -1.76
VID27	YNL212W	YUR1	P26725	428 aa		4.09	□□□□□ -1.76
VID27	YNL212W	IME2	P32581	645 aa		4.09	□□□□□ -1.76
VID27	YNL212W	MCM7	P38132	845 aa		4.09	□□□□□ -1.76
VID27	YNL212W	BIT2	P38346	545 aa		4.09	□□□□□ -1.76
VID27	YNL212W	CKB2	P38930	258 aa		4.09	□□□□□ -1.76
VID27	YNL212W	MBP1	P39678	833 aa		4.09	□□□□□ -1.76
VID27	YNL212W	GPB2	P39717	880 aa		4.09	□□□□□ -1.76
VID27	YNL212W	SPO74	P45819	413 aa		4.09	□□□□□ -1.76
VID27	YNL212W	SET2	P46995	733 aa	Known RBP	4.09	□□□□□ -1.76
VID27	YNL212W	PTK2	P47116	818 aa	Known RBP	4.09	□□□□□ -1.76
VID27	YNL212W	PCL10	P53124	433 aa		4.09	□□□□□ -1.76
VID27	YNL212W	NCS2	P53923	493 aa	Predicted RBP	4.09	□□□□□ -1.76
VID27	YNL212W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
VID27	YNL212W	CIA1	Q05583	330 aa		4.09	□□□□□ -1.76
VID27	YNL212W	PIG1	Q06216	648 aa		4.09	□□□□□ -1.76
VID27	YNL212W	RGA2	Q06407	1009 aa		4.09	□□□□□ -1.76
VID27	YNL212W	HIM1	Q06674	414 aa		4.09	□□□□□ -1.76
VID27	YNL212W	GYP1	Q08484	637 aa		4.09	□□□□□ -1.76
VID27	YNL212W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
VID27	YNL212W	RNA1	P11745	407 aa	Known RBP	4.08	□□□□□ -1.76
VID27	YNL212W	CMP2	P14747	604 aa		4.08	□□□□□ -1.76
VID27	YNL212W	TRX1	P22217	103 aa	Known RBP	4.08	□□□□□ -1.76
VID27	YNL212W	IRS4	P36115	615 aa	Known RBP	4.08	□□□□□ -1.76
VID27	YNL212W	GPT2	P36148	743 aa		4.08	□□□□□ -1.76
VID27	YNL212W	YBR284W	P38150	797 aa		4.08	□□□□□ -1.76
VID27	YNL212W	VPS41	P38959	992 aa		4.08	□□□□□ -1.76
VID27	YNL212W	NOP16	P40007	231 aa	Known RBP	4.08	□□□□□ -1.76
VID27	YNL212W	PSY2	P40164	858 aa		4.08	□□□□□ -1.76
VID27	YNL212W	NTA1	P40354	457 aa		4.08	□□□□□ -1.76
VID27	YNL212W	RGD2	P43556	714 aa		4.08	□□□□□ -1.76
VID27	YNL212W	RNR4	P49723	345 aa	Known RBP	4.08	□□□□□ -1.76
VID27	YNL212W	LCD1	Q04377	747 aa		4.08	□□□□□ -1.76
VID27	YNL212W	YMR111C	Q04461	462 aa	Predicted RBP	4.08	□□□□□ -1.76
VID27	YNL212W	GSF2	Q04697	403 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms