RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YKL091CP33324 310 aaKnown RBP2.13□□□□□ -2.07
CUL3YGR003W GGA2P38817 585 aaKnown RBP2.13□□□□□ -2.07
CUL3YGR003W VHR1P40522 640 aa2.13□□□□□ -2.07
CUL3YGR003W CCM1P48237 864 aaPredicted RBP2.13□□□□□ -2.07
CUL3YGR003W YKR011CQ02209 353 aa2.13□□□□□ -2.07
CUL3YGR003W ASM4Q05166 528 aa2.13□□□□□ -2.07
CUL3YGR003W PGK1P00560 416 aaKnown RBP2.13□□□□□ -2.07
CUL3YGR003W TOM70P07213 617 aaKnown RBP2.13□□□□□ -2.07
CUL3YGR003W MEF1P25039 761 aa2.13□□□□□ -2.07
CUL3YGR003W NDC80P40460 691 aa2.13□□□□□ -2.07
CUL3YGR003W HXT16P47185 567 aa2.13□□□□□ -2.07
CUL3YGR003W TAD1P53065 400 aa2.13□□□□□ -2.07
CUL3YGR003W PKH1Q03407 766 aa2.13□□□□□ -2.07
CUL3YGR003W GPR1Q12361 961 aa2.13□□□□□ -2.07
CUL3YGR003W DAL7P21826 554 aa2.12□□□□□ -2.07
CUL3YGR003W PER1P25625 357 aa2.12□□□□□ -2.07
CUL3YGR003W YHR078WP38799 552 aa2.12□□□□□ -2.07
CUL3YGR003W HRB1P38922 454 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
CUL3YGR003W HUL4P40985 892 aa2.12□□□□□ -2.07
CUL3YGR003W YDL124WQ07551 312 aaKnown RBP2.12□□□□□ -2.07
CUL3YGR003W SLK19Q08581 821 aaKnown RBP2.12□□□□□ -2.07
CUL3YGR003W YOR022CQ12204 715 aa2.12□□□□□ -2.07
CUL3YGR003W PHR1P05066 565 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
CUL3YGR003W LAT1P12695 482 aaKnown RBP2.11□□□□□ -2.07
CUL3YGR003W RFA1P22336 621 aaKnown RBP2.11□□□□□ -2.07
CUL3YGR003W CDC11P32458 415 aa2.11□□□□□ -2.07
CUL3YGR003W TYE7P33122 291 aaPredicted RBP2.11□□□□□ -2.07
CUL3YGR003W SPC29P33419 253 aa2.11□□□□□ -2.07
CUL3YGR003W EMC3P36039 253 aa2.11□□□□□ -2.07
CUL3YGR003W BCD1P38772 366 aa2.11□□□□□ -2.07
CUL3YGR003W GDH3P39708 457 aa2.11□□□□□ -2.07
CUL3YGR003W NUP82P40368 713 aa2.11□□□□□ -2.07
CUL3YGR003W ALG2P43636 503 aa2.11□□□□□ -2.07
CUL3YGR003W ORC1P54784 914 aaPredicted RBP2.11□□□□□ -2.07
CUL3YGR003W YDR338CQ05497 695 aa2.11□□□□□ -2.07
CUL3YGR003W MPH2P0CD99 609 aa2.11□□□□□ -2.07
CUL3YGR003W GAL11P19659 1081 aa2.11□□□□□ -2.07
CUL3YGR003W MIH1P23748 554 aa2.11□□□□□ -2.07
CUL3YGR003W CYS3P31373 394 aaKnown RBP2.11□□□□□ -2.07
CUL3YGR003W NGG1P32494 702 aa2.11□□□□□ -2.07
CUL3YGR003W GLG1P36143 616 aa2.11□□□□□ -2.07
CUL3YGR003W TPO2P53283 614 aa2.11□□□□□ -2.07
CUL3YGR003W YAP1802P53309 568 aa2.11□□□□□ -2.07
CUL3YGR003W DUS1P53759 423 aaKnown RBP2.11□□□□□ -2.07
CUL3YGR003W YPL068CQ02749 293 aa2.11□□□□□ -2.07
CUL3YGR003W MET7Q08645 548 aa2.11□□□□□ -2.07
CUL3YGR003W YBR182C-AQ8TGU6 64 aa2.11□□□□□ -2.07
CUL3YGR003W NUP1P20676 1076 aa2.1□□□□□ -2.07
CUL3YGR003W BDH2P39713 417 aa2.1□□□□□ -2.07
CUL3YGR003W MRK1P50873 501 aa2.1□□□□□ -2.07
CUL3YGR003W GEP3Q08622 556 aa2.1□□□□□ -2.07
CUL3YGR003W CDC9P04819 755 aa2.1□□□□□ -2.07
CUL3YGR003W CTR1P49573 406 aa2.1□□□□□ -2.07
CUL3YGR003W UBC9P50623 157 aaPredicted RBP2.1□□□□□ -2.07
CUL3YGR003W ASI2P53895 289 aa2.1□□□□□ -2.07
CUL3YGR003W NRG1Q03125 231 aa2.1□□□□□ -2.07
CUL3YGR003W THI21Q08975 551 aa2.1□□□□□ -2.07
CUL3YGR003W YTA7P40340 1379 aa2.09□□□□□ -2.07
CUL3YGR003W MCD4P36051 919 aa2.09□□□□□ -2.07
CUL3YGR003W UBC11P52492 156 aa2.09□□□□□ -2.07
CUL3YGR003W MUS81Q04149 632 aaPredicted RBP2.09□□□□□ -2.07
CUL3YGR003W RSC3Q06639 885 aa2.09□□□□□ -2.07
CUL3YGR003W Q0142Q9ZZW4 58 aa2.09□□□□□ -2.07
CUL3YGR003W RPS9AO13516 197 aaKnown RBP2.09□□□□□ -2.08
CUL3YGR003W MTC2P34246 357 aa2.09□□□□□ -2.08
CUL3YGR003W CHZ1P40019 153 aaPredicted RBP2.09□□□□□ -2.08
CUL3YGR003W ATP25Q03153 612 aa2.09□□□□□ -2.08
CUL3YGR003W RGC1Q06108 1083 aaKnown RBP2.09□□□□□ -2.08
CUL3YGR003W PRC1P00729 532 aa2.08□□□□□ -2.08
CUL3YGR003W SAK1P38990 1142 aa2.08□□□□□ -2.08
CUL3YGR003W ARG2P40360 574 aa2.08□□□□□ -2.08
CUL3YGR003W HOS4P40480 1083 aa2.08□□□□□ -2.08
CUL3YGR003W PFA3P42836 336 aa2.08□□□□□ -2.08
CUL3YGR003W NOG2P53742 486 aaKnown RBP2.08□□□□□ -2.08
CUL3YGR003W YOR131CQ12486 218 aa2.08□□□□□ -2.08
CUL3YGR003W MDM12Q92328 271 aa2.08□□□□□ -2.08
CUL3YGR003W PHO8P11491 566 aa2.07□□□□□ -2.08
CUL3YGR003W VBA3P25594 458 aa2.07□□□□□ -2.08
CUL3YGR003W HIR1P32479 840 aa2.07□□□□□ -2.08
CUL3YGR003W REV7P38927 245 aa2.07□□□□□ -2.08
CUL3YGR003W SSY5P47002 699 aa2.07□□□□□ -2.08
CUL3YGR003W RLP7P40693 322 aaKnown RBP2.07□□□□□ -2.08
CUL3YGR003W NIT3P49954 291 aa2.07□□□□□ -2.08
CUL3YGR003W MSH2P25847 964 aa2.06□□□□□ -2.08
CUL3YGR003W UBS1P38290 277 aa2.06□□□□□ -2.08
CUL3YGR003W PZF1P39933 429 aa2.06□□□□□ -2.08
CUL3YGR003W RNH70P53331 553 aa2.06□□□□□ -2.08
CUL3YGR003W ALG12P53730 551 aa2.06□□□□□ -2.08
CUL3YGR003W LEE1Q02799 301 aaKnown RBP2.06□□□□□ -2.08
CUL3YGR003W YDR514CQ04408 483 aa2.06□□□□□ -2.08
CUL3YGR003W NTG2Q08214 380 aa2.06□□□□□ -2.08
CUL3YGR003W APN1P22936 367 aa2.06□□□□□ -2.08
CUL3YGR003W THI4P32318 326 aa2.06□□□□□ -2.08
CUL3YGR003W SAP190P36123 1033 aa2.06□□□□□ -2.08
CUL3YGR003W YKR051WP36142 418 aa2.06□□□□□ -2.08
CUL3YGR003W SET5P38890 526 aaKnown RBP2.06□□□□□ -2.08
CUL3YGR003W DSS1P39112 969 aa2.06□□□□□ -2.08
CUL3YGR003W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
CUL3YGR003W ZIP2P53061 704 aa2.06□□□□□ -2.08
CUL3YGR003W ARP4P80428 489 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 133.8 ms