RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MPHOSPH8Q99549 860 aa20.81■□□□□ 0.92
PHGDH-208ENST00000641023 KCNJ4P48050 445 aa20.8■□□□□ 0.92
PHGDH-208ENST00000641023 MED23Q9ULK4 1368 aa20.8■□□□□ 0.92
PHGDH-208ENST00000641023 ZKSCAN1P17029 563 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-208ENST00000641023 USPL1Q5W0Q7 1092 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 VGLL2Q8N8G2 317 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-208ENST00000641023 ADORA1P30542 326 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 FAM196AQ6ZSG2 479 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 FOXD4L1Q9NU39 408 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 SBF2Q86WG5 1849 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
PHGDH-208ENST00000641023 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
PHGDH-208ENST00000641023 LRRFIP1Q32MZ4 808 aaKnown RBP20.78■□□□□ 0.92
PHGDH-208ENST00000641023 MCMDC2Q4G0Z9 681 aa20.78■□□□□ 0.92
PHGDH-208ENST00000641023 PRPF40BQ6NWY9 871 aaKnown RBP20.78■□□□□ 0.92
PHGDH-208ENST00000641023 RASEFQ8IZ41 740 aa20.78■□□□□ 0.92
PHGDH-208ENST00000641023 UPF3BQ9BZI7 483 aaKnown RBP20.78■□□□□ 0.92
PHGDH-208ENST00000641023 LY75O60449 1722 aa20.78■□□□□ 0.92
PHGDH-208ENST00000641023 GTF2E1P29083 439 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-208ENST00000641023 RNF20Q5VTR2 975 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 BICDL1Q6ZP65 573 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
PHGDH-208ENST00000641023 FKBP4Q02790 459 aaKnown RBP eCLIP20.77■□□□□ 0.92
PHGDH-208ENST00000641023 PUM3Q15397 648 aaKnown RBP20.77■□□□□ 0.92
PHGDH-208ENST00000641023 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 KRT27Q7Z3Y8 459 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 KCNB2Q92953 911 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 SETDB2Q96T68 719 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 NYXQ9GZU5 481 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 SEC31BQ9NQW1 1179 aa20.77■□□□□ 0.92
PHGDH-208ENST00000641023 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-208ENST00000641023 LPIN2Q92539 896 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 TAF5LO75529 589 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 SMIM5Q71RC9 77 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 ARHGEF1Q92888 912 aaKnown RBP20.76■□□□□ 0.91
PHGDH-208ENST00000641023 ZNF512BQ96KM6 892 aaPredicted RBP20.76■□□□□ 0.91
PHGDH-208ENST00000641023 CWC22Q9HCG8 908 aaKnown RBP20.76■□□□□ 0.91
PHGDH-208ENST00000641023 HELLSQ9NRZ9 838 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
PHGDH-208ENST00000641023 DDX60Q8IY21 1712 aaKnown RBP20.76■□□□□ 0.91
PHGDH-208ENST00000641023 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
PHGDH-208ENST00000641023 TMX3Q96JJ7 454 aa20.75■□□□□ 0.91
PHGDH-208ENST00000641023 CDC5LQ99459 802 aaKnown RBP20.75■□□□□ 0.91
PHGDH-208ENST00000641023 SRP68Q9UHB9 627 aaKnown RBP20.75■□□□□ 0.91
PHGDH-208ENST00000641023 SCN7AQ01118 1682 aa20.75■□□□□ 0.91
PHGDH-208ENST00000641023 LRP5O75197 1615 aa20.75■□□□□ 0.91
PHGDH-208ENST00000641023 RFC4P35249 363 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 CREB3L3Q68CJ9 461 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 LAMB2P55268 1798 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 SSFA2P28290 1259 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 SF3B3Q15393 1217 aaKnown RBP20.74■□□□□ 0.91
PHGDH-208ENST00000641023 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
PHGDH-208ENST00000641023 RNF113AO15541 343 aaKnown RBP20.73■□□□□ 0.91
PHGDH-208ENST00000641023 HMG20BQ9P0W2 317 aa20.73■□□□□ 0.91
PHGDH-208ENST00000641023 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
PHGDH-208ENST00000641023 FGFR2P21802 821 aa20.73■□□□□ 0.91
PHGDH-208ENST00000641023 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
PHGDH-208ENST00000641023 SEC62Q99442 399 aaKnown RBP20.73■□□□□ 0.91
PHGDH-208ENST00000641023 TAF1LQ8IZX4 1826 aa20.72■□□□□ 0.91
PHGDH-208ENST00000641023 SLC27A2O14975 620 aa20.72■□□□□ 0.91
PHGDH-208ENST00000641023 ZFYP08048 801 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-208ENST00000641023 SLC5A1P13866 664 aa20.72■□□□□ 0.91
PHGDH-208ENST00000641023 PSMA5P28066 241 aa20.72■□□□□ 0.91
PHGDH-208ENST00000641023 ZMYM1Q5SVZ6 1142 aa20.72■□□□□ 0.91
PHGDH-208ENST00000641023 ZNF772Q68DY9 489 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-208ENST00000641023 NBPF5PQ86XG9 351 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-208ENST00000641023 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
PHGDH-208ENST00000641023 JAKMIP1Q96N16 626 aaKnown RBP20.72■□□□□ 0.91
PHGDH-208ENST00000641023 C4BP0C0L5 1744 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 CHGBP05060 677 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 UQCRFS1P1P0C7P4 283 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 RAB3GAP1Q15042 981 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 LRRC4BQ9NT99 713 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 ADRA2BP18089 450 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 ZAP70P43403 619 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 SCARF1Q14162 830 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 CCDC102BQ68D86 513 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 TTC14Q96N46 770 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 ZSWIM6Q9HCJ5 1215 aa20.71■□□□□ 0.91
PHGDH-208ENST00000641023 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
PHGDH-208ENST00000641023 PHF14O94880 888 aa20.7■□□□□ 0.9
PHGDH-208ENST00000641023 HMGB2P26583 209 aaKnown RBP20.7■□□□□ 0.9
PHGDH-208ENST00000641023 MCAMP43121 646 aa20.7■□□□□ 0.9
PHGDH-208ENST00000641023 TTF1Q15361 905 aaPredicted RBP20.7■□□□□ 0.9
PHGDH-208ENST00000641023 AMIGO3Q86WK7 504 aa20.7■□□□□ 0.9
PHGDH-208ENST00000641023 ANKRD18AQ8IVF6 992 aa20.7■□□□□ 0.9
PHGDH-208ENST00000641023 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.9
PHGDH-208ENST00000641023 NLRP3Q96P20 1036 aa20.7■□□□□ 0.9
PHGDH-208ENST00000641023 RBM6P78332 1123 aaKnown RBP20.69■□□□□ 0.9
PHGDH-208ENST00000641023 NUCB2P80303 420 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 CUL4AQ13619 759 aa20.69■□□□□ 0.9
PHGDH-208ENST00000641023 ADCK5Q3MIX3 580 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms